Saccharomyces cerevisiae (budding yeast): YAL002W
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Entry
YAL002W CDS
T00005
Symbol
VPS8, FUN15, VPL8, VPT8
Name
(RefSeq) CORVET complex membrane-binding subunit VPS8
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04138
Autophagy - yeast
sce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
YAL002W (VPS8)
04148 Efferocytosis
YAL002W (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YAL002W (VPS8)
Membrane trafficking [BR:
sce04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
YAL002W (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
zf_RING_Vps8_fungal
TPR_VPS8_2
Beta-prop_VPS8
Beta-prop_HPS5
zf-RING_Vps41
zf-RING_5
VPS8_N
zf-C3HC4
zf-C3HC4_2
WD40_WDHD1_1st
zf-RING_2
Clathrin
zf_RING_Vps8
zf-ANAPC11
zf-RING_UBOX
GrpE
zf-C3H2C3
Beta-prop_EML_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
851261
NCBI-ProteinID:
NP_009399
SGD:
S000000002
UniProt:
P39702
Structure
PDB
PDBj
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All DBs
Position
I:143707..147531
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AA seq
1274 aa
AA seq
DB search
MEQNGLDHDSRSSIDTTINDTQKTFLEFRSYTQLSEKLASSSSYTAPPLNEDGPKGVASA
VSQGSESVVSWTTLTHVYSILGAYGGPTCLYPTATYFLMGTSKGCVLIFNYNEHLQTILV
PTLSEDPSIHSIRSPVKSIVICSDGTHVAASYETGNICIWNLNVGYRVKPTSEPTNGMTP
TPALPAVLHIDDHVNKEITGLDFFGARHTALIVSDRTGKVSLYNGYRRGFWQLVYNSKKI
LDVNSSKEKLIRSKLSPLISREKISTNLLSVLTTTHFALILLSPHVSLMFQETVEPSVQN
SLVVNSSISWTQNCSRVAYSVNNKISVISISSSDFNVQSASHSPEFAESILSIQWIDQLL
LGVLTISHQFLVLHPQHDFKILLRLDFLIHDLMIPPNKYFVISRRSFYLLTNYSFKIGKF
VSWSDITLRHILKGDYLGALEFIESLLQPYCPLANLLKLDNNTEERTKQLMEPFYNLSLA
ALRFLIKKDNADYNRVYQLLMVVVRVLQQSSKKLDSIPSLDVFLEQGLEFFELKDNAVYF
EVVANIVAQGSVTSISPVLFRSIIDYYAKEENLKVIEDLIIMLNPTTLDVDLAVKLCQKY
NLFDLLIYIWNKIFDDYQTPVVDLIYRISNQSEKCVIFNGPQVPPETTIFDYVTYILTGR
QYPQNLSISPSDKCSKIQRELSAFIFSGFSIKWPSNSNHKLYICENPEEEPAFPYFHLLL
KSNPSRFLAMLNEVFEASLFNDDNDMVASVGEAELVSRQYVIDLLLDAMKDTGNSDNIRV
LVAIFIATSISKYPQFIKVSNQALDCVVNTICSSRVQGIYEISQIALESLLPYYHSRTTE
NFILELKEKNFNKVLFHIYKSENKYASALSLILETKDIEKEYNTDIVSITDYILKKCPPG
SLECGKVTEVIETNFDLLLSRIGIEKCVTIFSDFDYNLHQEILEVKNEETQQKYLDKLFS
TPNINNKVDKRLRNLHIELNCKYKSKREMILWLNGTVLSNAESLQILDLLNQDSNFEAAA
IIHERLESFNLAVRDLLSFIEQCLNEGKTNISTLLESLRRAFDDCNSAGTEKKSCWILLI
TFLITLYGKYPSHDERKDLCNKLLQEAFLGLVRSKSSSQKDSGGEFWEIMSSVLEHQDVI
LMKVQDLKQLLLNVFNTYKLERSLSELIQKIIEDSSQDLVQQYRKFLSEGWSIHTDDCEI
CGKKIWGAGLDPLLFLAWENVQRHQDMISVDLKTPLVIFKCHHGFHQTCLENLAQKPDEY
SCLICQTESNPKIV
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaatggccttgaccacgacagcagatctagcatcgatacgactattaatgac
actcaaaagactttcctagaatttagatcgtatacccaattaagtgaaaaactggcatct
agttcttcatatacggcacctcccctgaacgaagatggtcctaaaggggtagcttctgca
gtgtcacaaggctccgaatccgtagtctcatggacaactttaacacacgtatattccatc
ctgggtgcttatggagggcccacgtgcttgtatccgacagccacgtattttttgatgggc
acttctaaaggatgcgtactcatttttaattataatgaacatttgcagacaatcctagtg
ccgaccttatctgaggacccttctattcactcaataagaagtccagtgaaatcaattgtc
atatgttccgatggtactcatgtagctgcctcatacgagaccggaaatatatgcatttgg
aacttgaacgtagggtatagagtgaaacccacttctgaaccaacaaatggtatgacccca
acgcctgccttaccggcagtcttacacatcgatgaccatgtgaacaaggaaatcacaggg
ttagacttttttggtgctcggcatacagccctgattgttagtgataggacaggtaaagta
tcactctataacggttacagaagaggcttttggcagttggtgtataattcaaaaaaaatt
ttagatgtgaactcttccaaggagaaattaataaggtcaaagttgtctccactaatatca
cgggagaaaatttccactaatttgttgagtgtactcacaactacacattttgcccttatt
ttattatcgccacacgtttctttgatgtttcaagaaactgttgaaccctcagtacaaaat
tctctagtcgtgaatagctctatttcatggactcaaaactgttccagggttgcttattcc
gtaaataataaaatttctgttatttccatatcttcatcagacttcaatgttcagtccgct
agccattctcctgaatttgcagaatctatattatccattcaatggattgaccagctccta
cttggtgttttaaccatatcgcaccaatttttggtattgcacccccaacatgacttcaag
atcctgttaagattggattttctgattcacgatttgatgatcccacctaataaatatttt
gtaataagtagaagaagtttctacctgttaacaaactactcatttaaaattggcaaattt
gtgtcttggtcagatattactttaagacatattttgaaaggcgactacttgggtgcattg
gagttcatagaatcacttttgcaaccttactgtccactggcaaacttgttgaagctagat
aataatacggaagagaggactaagcaacttatggaaccattttacaatctgtccttggct
gccctaaggtttcttataaaaaaagataatgccgactacaatagggtttaccaattatta
atggtagttgttcgtgttttgcagcaatcttccaaaaaactagactcaattccttctcta
gacgtctttttggaacagggtctggagttctttgaattgaaggacaacgcggtatatttt
gaagttgtagcaaatattgttgcccaaggatcagttacgtcaatttccccagttcttttc
aggtccataattgattactatgctaaggaggagaatttaaaagtaattgaagacttaatc
atcatgttaaatcctactacgcttgatgttgatcttgccgtcaaactatgccaaaagtat
aatttgttcgatttattaatatatatttggaacaagatctttgatgattatcaaacccca
gtggtggacttgatatacaggatttctaaccaaagtgaaaaatgtgtgatcttcaatggt
cctcaagtacctcctgaaacgactatatttgattacgtaacgtatatccttactggcagg
caatatccacaaaacttgtctatatcaccaagtgataaatgctccaaaatacaaagggaa
ctttcagcatttatttttagtggcttctccataaaatggccgtcgaacagcaatcataaa
ctttacatatgcgaaaatccagaagaagagccagcatttccttactttcaccttttattg
aaatcgaatccgagtaggttcttagcaatgctcaatgaagtgtttgaagcgtccttgttt
aacgatgacaatgacatggttgcatcagttggagaagcagaattggtaagtaggcaatat
gttattgatctactattggatgctatgaaagatacgggaaattcagacaacatcagggta
cttgttgcaattttcattgcaactagtatatcaaaatatcctcaatttattaaagtgtct
aaccaagccctcgactgcgttgttaataccatatgctcctctagggttcaaggtatatat
gaaatttctcaaatagctctggagtcgcttttaccctattatcattcaagaacaacagaa
aattttatactggaactaaaagaaaaaaatttcaataaagttcttttccatatctataaa
agtgaaaataagtacgccagtgcgctttcacttattttagaaactaaggacatcgaaaaa
gaatataacacggacattgtatccataaccgactacatactcaaaaaatgcccacctgga
agtttagaatgtggcaaagttactgaagttatcgagacgaactttgatcttcttctctca
aggatcggtatcgaaaaatgcgtcacaattttttctgactttgactataatcttcatcaa
gaaatcctggaagtaaagaatgaggagactcagcaaaagtatttggataagcttttttct
acgccaaatatcaacaataaggtcgataagcgtttaagaaatttacacatcgaattgaac
tgtaaatacaagagcaaaagggaaatgattctttggcttaatggtacagttctcagcaac
gctgagagcttacaaattctggacttattgaatcaagactctaattttgaagctgcagct
ataattcacgaacgcttggaaagttttaacctagcagtcagggatttattaagttttatt
gaacaatgtctaaatgaagggaaaacaaatatatctactttattggaatctttgaggagg
gcctttgatgattgtaattctgctggtaccgagaaaaaatcgtgttggatattattgatt
acattcctgatcactctatatgggaaatatccttcacacgatgaaaggaaagatttatgt
aataaactacttcaagaagcatttttgggattggttaggtccaagagttcctctcagaag
gattcaggtggggaattctgggaaataatgtcttctgttcttgagcaccaagacgttatt
ttaatgaaagttcaggatttaaagcaactgctactgaatgtttttaatacttataaattg
gaaagatctctttctgagttgattcaaaagattatagaggattcttcgcaagatcttgtt
caacagtatagaaaatttctgagtgaagggtggtctatacacaccgacgactgcgaaatc
tgcgggaaaaaaatatggggagctggtctggacccattactttttctagcttgggaaaat
gtacagcgccaccaagatatgattagtgtagatctcaaaactccccttgtcatattcaaa
tgtcaccatggctttcaccagacttgcctcgaaaacttggcccagaaacccgatgaatat
tcttgtttaatttgccagacggaatctaacccaaaaatagtataa
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