Saccharomyces cerevisiae (budding yeast): YAR008W
Help
Entry
YAR008W CDS
T00005
Symbol
SEN34, FUN4
Name
(RefSeq) tRNA splicing endonuclease subunit SEN34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sce03016
]
YAR008W (SEN34)
Enzymes [BR:
sce01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
YAR008W (SEN34)
Transfer RNA biogenesis [BR:
sce03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
YAR008W (SEN34)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
DUF7390
Motif
Other DBs
NCBI-GeneID:
851267
NCBI-ProteinID:
NP_009405
SGD:
S000000066
UniProt:
P39707
LinkDB
All DBs
Position
I:158966..159793
Genome browser
AA seq
275 aa
AA seq
DB search
MPPLVFDIDHIKLLRKWGICGVLSGTLPTAAQQNVFLSVPLRLMLEDVLWLHLNNLADVK
LIRQEGDEIMEGITLERGAKLSKIVNDRLNKSFEYQRKFKKDEHIAKLKKIGRINDKTTA
EELQRLDKSSNNDQLIESSLFIDIANTSMILRDIRSDSDSLSRDDISDLLFKQYRQAGKM
QTYFLYKALRDQGYVLSPGGRFGGKFIAYPGDPLRFHSHLTIQDAIDYHNEPIDLISMIS
GARLGTTVKKLWVIGGVAEETKETHFFSIEWAGFG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgctagtatttgacatagatcacatcaaacttctaaggaaatggggtatttgt
ggtgtgttatctggaactttgcctactgcagcacagcaaaatgtatttttgtcggtacct
ttgaggcttatgttagaagatgtgctgtggctgcatttgaacaatcttgccgatgtgaaa
ttaataagacaagagggagatgagattatggagggaataacattagagcggggcgccaaa
ctatctaaaattgtcaacgatcgtttgaacaagtcatttgaatatcagagaaagttcaaa
aaggatgaacacattgcaaaattaaagaaaatcggtagaatcaatgataaaaccacagct
gaagaattgcaacggcttgataaatctagcaataatgaccagctaattgaatcttctttg
ttcattgacattgctaatacctctatgattttaagagacatacggagtgattcagacagc
ttatcccgcgatgatatcagtgatttgttatttaagcagtacagacaggcaggaaaaatg
cagacctatttcttatacaaggcattgagagatcaagggtacgttttgtccccaggtgga
cgttttggtgggaagtttatagcataccctggtgatcctcttcgtttccattcacatctg
acgatacaagatgcgattgattatcataatgagccgattgacctaatatccatgataagt
ggtgcaagactaggaacgactgtgaaaaaactttgggtcataggcggtgttgcggaagag
acaaaggaaactcatttcttctcaatagaatgggctggatttggttaa
DBGET
integrated database retrieval system
