Saccharomyces cerevisiae (budding yeast): YBR065C
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Entry
YBR065C CDS
T00005
Symbol
ECM2, SLT11
Name
(RefSeq) Ecm2p
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YBR065C (ECM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YBR065C (ECM2)
Spliceosome [BR:
sce03041
]
Complex B
Other components
Prp19-related factors
YBR065C (ECM2)
Complex C
YBR065C (ECM2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
Motif
Other DBs
NCBI-GeneID:
852357
NCBI-ProteinID:
NP_009621
SGD:
S000000269
UniProt:
P38241
Structure
PDB
PDBj
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All DBs
Position
II:complement(368584..369678)
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AA seq
364 aa
AA seq
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MNDEINEPPPNICEQCLGDEANIRMTKIPQGSECKICTLPFTLYHFKTSKRSNNIIKTLI
CVRCATQRNICQCCMLDSRWHIPIQLRDHLISLVNEENVMTEEAKNDMMKRFLSLKNVKL
GGAQITSDPSEADNIVDKLKNILLRATSDGPSTPLIKNTTALYKNEKGANEVKNLEKYAS
VDISHILKKLPLNESFLKNPSTKSFFLYNIDASIPEWKITDTVSQLLGIKKWKDGNSLSL
IVNHKAKCGGLRFQSSELGERFVSKISETLVTPKGLKRGVLLIDRFRIFIIPWSSGFSAA
SFGTNTAENIKLSLSLNKLIQLELGLSFPTKSTDNAKNDKKKTSKKVHKDRSKKSKPRAN
KLTI
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaaattaatgagccaccgcccaatatatgtgagcagtgcttaggtgatgag
gctaatatacgaatgactaaaattccacaaggctctgaatgtaagatttgtaccttaccg
ttcaccttataccattttaagacgtctaaacgaagcaataatatcattaaaacattaata
tgtgtacggtgcgccactcagagaaacatttgtcaatgctgtatgcttgattcaagatgg
cacatccctatacaactgcgggatcatttaatatcccttgtgaacgaggaaaacgttatg
acggaggaagcaaaaaacgacatgatgaaaaggtttctgtcactaaaaaacgtgaaatta
ggaggagctcagattacgagtgatccgtcagaagcagataatatcgttgataaattgaaa
aatatacttctgcgagcaacatcagatggcccaagtactccgttaataaaaaacacaact
gcattgtataaaaatgaaaaaggtgcaaatgaggtcaaaaacttggaaaagtacgcgtcc
gtggacatttctcatattttgaagaaactacccttgaatgaatcgtttttaaaaaacccc
tccaccaaatcattttttctgtataatattgatgcctcgatccctgaatggaaaataact
gatacagtttcgcaattattgggtataaagaaatggaaggatggaaattcattgtcatta
atagtcaaccacaaggcgaagtgtggtggcctaagatttcaatctagtgaattgggggag
cggtttgtcagtaaaataagtgagacacttgtcacaccaaagggcctaaagagaggagtt
ttacttattgaccgttttagaatctttatcattccgtggtcgtctggcttttcagctgcg
tcattcggaaccaacactgcagaaaatataaaacttagtttaagtttgaataagcttatt
cagttggagctagggctttcttttcctacaaaaagcacagataacgcaaagaatgacaag
aaaaagacatcaaaaaaagttcataaggacagatcaaagaaatcgaaacctcgcgctaac
aagttaacaatatag
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