Saccharomyces cerevisiae (budding yeast): YBR087W
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Entry
YBR087W CDS
T00005
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03030
DNA replication
sce03410
Base excision repair
sce03420
Nucleotide excision repair
sce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YBR087W (RFC5)
03410 Base excision repair
YBR087W (RFC5)
03420 Nucleotide excision repair
YBR087W (RFC5)
03430 Mismatch repair
YBR087W (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sce03032
]
YBR087W (RFC5)
03036 Chromosome and associated proteins [BR:
sce03036
]
YBR087W (RFC5)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YBR087W (RFC5)
DNA replication proteins [BR:
sce03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
YBR087W (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
YBR087W (RFC5)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
YBR087W (RFC5)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
YBR087W (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
YBR087W (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
AAA_22
AAA_assoc_2
Rad17
AAA_16
DNAX_ATPase_lid
NYD-SP12_N
Rep_fac_C
RuvB_N
Motif
Other DBs
NCBI-GeneID:
852383
NCBI-ProteinID:
NP_009644
SGD:
S000000291
UniProt:
P38251
Structure
PDB
PDBj
LinkDB
All DBs
Position
II:423765..424829
Genome browser
AA seq
354 aa
AA seq
DB search
MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI
FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME
QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP
IKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM
ALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL
KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCLD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtgggtagataaatacagacctaagtccttgaatgctctttcacataatgaa
gagttgacaaattttctaaaatcgttatctgatcagcctcgtgatttacctcatctttta
ctgtatggaccaaatggtacaggtaagaaaacgcgttgtatggcattattggagtccata
tttggacctggagtctatagattgaaaattgatgtcagacaatttgtcactgcttcgaac
agaaaactagaactgaatgtggtcagctcgccataccatttagagatcacgccaagtgat
atgggtaacaatgatagaattgtcatccaagaactattgaaagaagtggctcaaatggaa
caagtggactttcaagattctaaggatggacttgcccatagatataagtgtgttattatc
aacgaggcgaactcgttaacaaaagatgctcaagctgctttaagacgtaccatggaaaaa
tactccaaaaacattaggttgataatggtctgcgattcgatgtcgcctataattgctcct
atcaaatcccgttgtctgttgattcgttgtcctgcaccaagcgatagcgaaatttcaact
atcttgtctgatgtggtgacaaatgaaagaatacaactagaaacaaaggatattttaaaa
agaattgctcaggcatcgaatggaaacttgcgagtctccctattaatgcttgaatctatg
gcactgaacaacgaattagcattgaaaagcagtagccctataataaaaccagattggatt
atagtgatccataaattaacgaggaaaatcgttaaagagagatctgtcaattctttaatc
gaatgcagagctgtcctatacgatttactagctcattgtatacctgccaatatcatctta
aaggaactaacgttttctttgttggatgtggaaaccctgaataccacgaataaatcgtcc
ataattgaatactcaagtgtttttgacgaaagattatcacttggaaacaaagcaatattc
catttggaagggttcatagcaaaagttatgtgctgtctagattaa
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