Saccharomyces cerevisiae (budding yeast): YBR172C
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Entry
YBR172C CDS
T00005
Symbol
SMY2
Name
(RefSeq) Smy2p
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YBR172C (SMY2)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
YBR172C (SMY2)
Surveillance factors
Other surveillance factors
YBR172C (SMY2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
852470
NCBI-ProteinID:
NP_009731
SGD:
S000000376
UniProt:
P32909
Structure
PDB
PDBj
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Position
II:complement(579150..581372)
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AA seq
740 aa
AA seq
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MIAPDSQRLFGSFDEQFKDLKLDSVDTENNNTHGVSTILDSSPASVNNNTNGAVAASVNT
VPGSTFRSNTPLLGGRHPLSRTSSLIDSIGIQRAASPFSSMKEPFIPQSSGVMSSSFWHG
DHPESRVSTPVQQHPLLQRNESSSSFSYAANLGVNLSTHSLAVDITPLSTPTAAQSHVNL
FPSSDIPPNMSMNGMSQLPAPVSVESSWRYIDTQGQIHGPFTTQMMSQWYIGGYFASTLQ
ISRLGSTPETLGINDIFITLGELMTKLEKYDTDPFTTFDKLHVQTTSSDSINLNLAPYAS
GVAATGTIKATENDIFKPLTHDNIWDMDGGTTSKGVDIKLASATTISQTDESHKQEYKST
TMLEKGKKEKSESVAKALLDEQEKRNRELKRKEEARLSKKQKQKEDDLLKKQKEQKEQKE
KEALEAEKQKKSEKTKKDTQTQTEGFKTSKDLPSLNSSSANPAPWASKVKVNNAIETSIK
NGVSSTGKKKGEPLGLQQRNSKEEKQKEELKSVLNWANKSSLPSNQTIDIKSQFQKSPKG
MKESSPLKELEDPNFIEEQKKLWEKVQSSSKQVKSTSSASTTTSSWTTVTSKGKAPIGTV
VSPYSKTNTSLNSSLTAKTSTTSTTTTFASMNNVSPRQEFIKWCKSQMKLNSGITNNNVL
ELLLSLPTGPESKELIQETIYANSDVMDGRRFATEFIKRRVACEKQGDDPLSWNEALALS
GNDDDGWEFQVVSKKKGRKH
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaccagactcgcaaagattattcggttcctttgatgaacagtttaaggactta
aaactagattcagtcgatacagaaaacaataacacacacggtgtttctactatcctggat
tcctcccctgcgagcgttaataacaatacaaacggtgctgttgctgcaagcgtgaataca
gtccctggatcgacgtttagatccaatacacctcttttaggaggtcgacatccactcagt
aggacgtcttccttaatcgattctattggtatacagcgtgctgcgtcaccattttcttct
atgaaagagccttttattcctcaaagttcgggagtaatgagttcctctttttggcacggc
gaccatcctgaatcacgggttagtacgcctgttcagcagcatccactattgcaaagaaac
gagtcctcctcctcctttagttatgctgctaatcttggagtgaatctgagtacacattca
ttggcggtagatattactccattaagtacaccaactgctgcccaatctcatgtcaatttg
tttccgtcctctgatattcctcctaatatgagcatgaacggaatgtcacaactcccagca
ccagtttcagttgaatccagttggaggtacatagacacgcagggacagattcatggtcca
tttactacccaaatgatgtcacaatggtacataggtggctattttgcttcaacccttcag
atttcaagattgggaagcactccagaaacgctaggaataaacgatattttcatcacactt
ggtgagttaatgactaaactcgagaagtatgatacggatccattcactacttttgacaaa
cttcacgttcaaacaaccagctctgattctatcaacttgaatctagctccttacgcaagc
ggtgttgccgctactggcactattaaagctactgaaaacgatattttcaagccattgaca
catgacaatatctgggatatggatggaggtaccacctccaagggagtcgatattaaatta
gcctcagcaaccaccattagtcaaacagatgaatctcacaagcaagaatacaaatcgacc
actatgctggaaaaagggaagaaggaaaaatccgaatctgtagcaaaagcgttattggat
gaacaagagaaacggaacagagaactcaaaaggaaggaagaagctcgcttatcgaagaaa
caaaagcaaaaagaggatgatttattgaagaaacaaaaggaacaaaaggaacaaaaggaa
aaagaagctttggaagcagaaaagcaaaaaaaatcagaaaagacaaaaaaggacacacaa
acacaaacagaaggctttaagacatcaaaagatttgccttcattaaattcctcaagcgcg
aatccggcaccatgggcctcaaaagtcaaagttaacaatgcaatcgaaacttcaattaaa
aatggtgtaagtagcactggaaagaagaaaggagaacccttaggtctacaacagaggaac
agcaaagaagaaaagcaaaaggaggaactaaaatccgtgcttaactgggctaacaagtcc
agcctaccatcgaatcaaactattgatattaaatctcagtttcaaaaaagcccaaaaggg
atgaaagagtcgtctccgttaaaggagttggaagatccaaatttcatagaagagcagaaa
aaactatgggaaaaggttcagagttcttccaaacaagtaaagtccacatcctctgcatct
actaccacatcttcttggactacggtgacttctaaagggaaagcacctataggaaccgtt
gtctccccatattcaaaaaccaataccagtttaaattcttcattaacggcaaaaactagc
acaacttctactaccactacctttgctagcatgaacaatgtttctccccggcaagaattt
atcaaatggtgtaaatcacagatgaaattaaattctggaataaccaataacaatgtctta
gaactattattgagtttacctacggggccagaatctaaagaattgattcaagaaacaatt
tatgccaatagtgacgttatggatggtagaagatttgccactgaatttattaaaagacgt
gttgcgtgcgaaaaacaaggtgatgatccactaagttggaatgaagcgctagctctatca
ggcaatgatgacgacggctgggaattccaagtagtgagcaagaagaagggtagaaaacac
tga
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