Saccharomyces cerevisiae (budding yeast): YBR198C
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Entry
YBR198C CDS
T00005
Symbol
TAF5, TAF90
Name
(RefSeq) chromatin modification protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
YBR198C (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YBR198C (TAF5)
03036 Chromosome and associated proteins [BR:
sce03036
]
YBR198C (TAF5)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
YBR198C (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
YBR198C (TAF5)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
YBR198C (TAF5)
STAGA complex
YBR198C (TAF5)
TFTC complex
YBR198C (TAF5)
SAGA complex
YBR198C (TAF5)
SLIK complex
YBR198C (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_SCAP
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EIPR1
LisH
WD40_RFWD3
Beta-prop_Nup120_160
PROPPIN
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
RMC1_N
PEP5_VPS11_N
Nucleoporin_N
LisH_WDR26
Cytochrom_D1
Beta-prop_NWD2_C
Beta-prop_VPS8
LisH_PAC1
WDR54
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
852497
NCBI-ProteinID:
NP_009757
SGD:
S000000402
UniProt:
P38129
Structure
PDB
PDBj
LinkDB
All DBs
Position
II:complement(616127..618523)
Genome browser
AA seq
798 aa
AA seq
DB search
MSQKQSTNQNQNGTHQPQPVKNQRTNNAAGANSGQQPQQQSQGQSQQQGRSNGPFSASDL
NRIVLEYLNKKGYHRTEAMLRAESGRTLTPQNKQSPANTKTGKFPEQSSIPPNPGKTAKP
ISNPTNLSSKRDAEGGIVSSGRLEGLNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYP
IFIYLFLNLVAKNPVYARRFFDRFSPDFKDFHGSEINRLFSVNSIDHIKENEVASAFQSH
KYRITMSKTTLNLLLYFLNENESIGGSLIISVINQHLDPNIVESVTAREKLADGIKVLSD
SENGNGKQNLEMNSVPVKLGPFPKDEEFVKEIETELKIKDDQEKQLNQQTAGDNYSGANN
RTLLQEYKAMNNEKFKDNTGDDDKDKIKDKIAKDEEKKESELKVDGEKKDSNLSSPARDI
LPLPPKTALDLKLEIQKVKESRDAIKLDNLQLALPSVCMYTFQNTNKDMSCLDFSDDCRI
AAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYL
LSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIY
PLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVC
PDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRV
WDLKKATTEPSAEPDEPFIGYLGDVTASINQDIKEYGRRRTVIPTSDLVASFYTKKTPVF
KVKFSRSNLALAGGAFRP
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaagcaaagtacgaatcagaatcaaaatggcacgcatcagccacaaccagta
aagaatcaacgaactaataatgctgctggcgccaattccggccagcagccacagcaacag
agtcaaggccagtctcaacagcaggggaggtccaatggtccgttttcggcgtcagacttg
aatagaattgtcctagagtacctgaataaaaagggataccaccgtacagaggccatgctg
agagccgagagtggacgtacactaacacctcaaaacaaacaatcaccagcaaatactaaa
acaggtaaatttcctgaacaatcatcaattcctccgaaccccgggaagacagctaaaccc
ataagcaatccaactaatttgtcatccaagagagatgcagaaggtggtatagtatctagc
gggcgactagaagggctcaacgcacctgaaaattatatacgtgcatattcaatgttgaaa
aactgggtagattcgtcgctggaaatttacaagccggaactaagctacatcatgtaccca
atattcatttatttatttttaaatttggtggccaaaaatcctgtttacgcccgtcgtttc
tttgatagattttctcccgattttaaggacttccatggctcagaaattaatagacttttc
agtgtcaattctatagatcacatcaaggaaaatgaggtcgcaagtgctttccaatctcac
aagtacagaattactatgtctaaaaccactttaaatcttctcttatattttttgaatgaa
aatgagagtattggaggttcattaataattagtgtaataaatcagcacctagatccaaat
attgtagaatcagtaaccgcaagggaaaaattggctgatggaataaaagttctcagtgat
agtgaaaacggaaatggtaaacaaaatttagaaatgaattctgttcctgtcaagctggga
cctttcccaaaagacgaggagtttgttaaggagattgaaactgaattgaaaattaaggat
gatcaagagaaacaactaaatcaacaaactgcaggtgacaattacagtggagccaacaat
agaaccttattgcaagaatataaagctatgaataacgaaaaatttaaggataatactggc
gacgatgataaagacaaaattaaagataaaatcgccaaagatgaggaaaaaaaagagagc
gaattgaaggtggatggtgaaaaaaaagacagcaatttatcttcgccagcacgtgatatt
ttacctttaccaccaaagacggcactagatttgaagttggagattcagaaggtcaaggaa
tctcgtgatgccatcaaactagataatttacagttggccttaccaagcgtgtgcatgtat
acattccaaaacacaaataaagacatgtcatgtttagatttcagtgatgattgtaggata
gcggctgctggctttcaagacagttatatcaagatctggtcactcgacggctcatcactt
aataatcctaacatcgcgttaaataacaacgacaaggatgaagacccaacgtgtaaaact
ttggtggggcacagtggtacagtatattcaacaagtttcagtccggataataagtattta
ctttctggttctgaagataaaaccgtcaggctatggtccatggatactcacaccgcgcta
gtaagctataagggccataatcaccctgtgtgggatgttagtttctccccgctaggccat
tatttcgccactgcatcgcacgaccaaaccgcaaggttatggtcatgcgatcacatatat
ccattaagaatatttgcaggacatttaaatgatgttgattgtgtgtcatttcatccgaac
ggttgctatgtgtttacgggatccagcgataagacgtgtcgaatgtgggacgtttctaca
ggcgactcggttaggttatttcttggacatactgcgcccgtcatttctattgctgtttgt
ccagatggtaggtggttgtccactggtagcgaagatggtattattaatgtatgggatatt
ggtaccggcaaaaggttgaaacaaatgcgtggccatggtaagaatgccatttattcctta
tcatatagcaaagagggaaacgtacttattagtggaggtgccgatcatacagtccgtgta
tgggatttgaaaaaggccactactgagccaagcgcagaaccagatgagccattcattgga
tacttgggtgacgttactgcatctataaaccaagatataaaagaatatggtcgcagaaga
acagtaatacctacaagcgatttagtagcgtcgttctacaccaaaaagacgcctgttttt
aaggtcaagttcagcagaagcaatttagcccttgcaggaggtgctttcaggccataa
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