Saccharomyces cerevisiae (budding yeast): YBR279W
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Entry
YBR279W CDS
T00005
Symbol
PAF1
Name
(RefSeq) Paf1p
KO
K15174
RNA polymerase II-associated factor 1
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
YBR279W (PAF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YBR279W (PAF1)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
YBR279W (PAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
852582
NCBI-ProteinID:
NP_009838
SGD:
S000000483
UniProt:
P38351
Structure
PDB
PDBj
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All DBs
Position
II:761257..762594
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AA seq
445 aa
AA seq
DB search
MSKKQEYIAPIKYQNSLPVPQLPPKLLVYPESPETNADSSQLINSLYIKTNVTNLIQQDE
DLGMPVDLMKFPGLLNKLDSKLLYGFDNVKLDKDDRILLRDPRIDRLTKTDISKVTFLRR
TEYVSNTIAAHDNTSLKRKRRLDDGDSDDENLDVNHIISRVEGTFNKTDKWQHPVKKGVK
MVKKWDLLPDTASMDQVYFILKFMGSASLDTKEKKSLNTGIFRPVELEEDEWISMYATDH
KDSAILENELEKGMDEMDDDSHEGKIYKFKRIRDYDMKQVAEKPMTELAIRLNDKDGIAY
YKPLRSKIELRRRRVNDIIKPLVKEHDIDQLNVTLRNPSTKEANIRDKLRMKFDPINFAT
VDEEDDEDEEQPEDVKKESEGDSKTEGSEQEGENEKDEEIKQEKENEQDEENKQDENRAA
DTPETSDAVHTEQKPEEEKETLQEE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaaacaggaatatattgcaccaataaaataccaaaacagcttgcctgtgcca
caattacctcctaaacttctggtttaccccgagtctccggagacgaatgcagactcctcc
caactaatcaattcactatacatcaaaacaaacgtcactaatctaattcaacaggatgaa
gatttaggtatgccggttgatttgatgaaattcccaggcctattgaacaaattagattct
aaactgctttacggctttgataatgtgaaattggacaaagatgatcgaattttactgagg
gaccctagaatagatagactgaccaagactgatatatcaaaggttaccttcttgagacgc
accgaatatgtctccaatacaattgcagcccatgataacacatcgttgaaaaggaaaagg
cgcttggatgatggagattcggatgatgaaaaccttgatgttaatcatataattagtagg
gtcgaaggaacattcaataagacggacaaatggcaacatccggtgaagaagggtgtcaag
atggttaaaaaatgggacctattgcccgacacagcttcaatggaccaggtgtattttatc
ctaaaattcatgggcagtgcatcattggatactaaagaaaaaaaatctttaaatacagga
attttcaggccagtggaactggaagaagacgaatggatttccatgtatgccacagatcat
aaggactctgccattctggaaaacgaattggaaaagggtatggatgaaatggatgatgac
tctcatgaaggtaaaatatacaagtttaaaaggataagagactacgacatgaaacaagtg
gctgaaaagccaatgacagagttagctatacgtttgaatgataaggacggcatagcttac
tacaaacccctacgttcaaagatcgaattaagacgtaggagagtaaacgacatcattaaa
cctttggtgaaggagcacgatatagaccaacttaatgttactttgagaaaccctagcact
aaggaagctaacataagggacaagttaagaatgaagtttgaccccataaatttcgccact
gtagatgaagaagacgatgaagacgaggagcaaccagaagacgttaagaaagaatcggaa
ggcgattcaaaaacagaaggttctgagcaagaaggagaaaatgagaaggatgaagaaatc
aaacaggaaaaagagaatgaacaagatgaagaaaataaacaagatgaaaaccgtgcagct
gatacgcccgaaacttcagatgctgttcatactgaacaaaaaccagaggaagaaaaggaa
actttacaagaagaatag
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