Saccharomyces cerevisiae (budding yeast): YCR057C
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Entry
YCR057C CDS
T00005
Symbol
PWP2, UTP1, YCR055C, YCR058C
Name
(RefSeq) snoRNA-binding rRNA-processing protein PWP2
KO
K14558
periodic tryptophan protein 2
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YCR057C (PWP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sce03009
]
YCR057C (PWP2)
Ribosome biogenesis [BR:
sce03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
YCR057C (PWP2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Utp12
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
NBCH_WD40
DSE1_N
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_NOL10_N
PAC11
ASA1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
eIF2A
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_ACSF4
PROPPIN
Beta-prop_DCAF4
WD40_RFWD3
WD40_like
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_WDR19_2nd
Beta-prop_IFT80_2nd
Beta-prop_WDR75_2nd
Beta-prop_pof12
Beta-prop_ELP1_2nd
Beta-prop_EIPR1
PEP5_VPS11_N
WDR54
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
850422
NCBI-ProteinID:
NP_009984
SGD:
S000000653
UniProt:
P25635
Structure
PDB
PDBj
LinkDB
All DBs
Position
III:complement(220457..223228)
Genome browser
AA seq
923 aa
AA seq
DB search
MKSDFKFSNLLGTVYRQGNITFSDDGKQLLSPVGNRVSVFDLINNKSFTFEYEHRKNIAA
IDLNKQGTLLISIDEDGRAILVNFKARNVLHHFNFKEKCSAVKFSPDGRLFALASGRFLQ
IWKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDSRFILTTSKDLSAKIWSVDSEEK
NLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWEFTKRPSDDDDNESEDDDKQEE
VDISKYSWRITKKHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSM
GQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRV
VTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYR
NFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLS
FSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSMRPDGKEVAVSTLKGQIS
IFNIEDAKQVGNIDCRKDIISGRFNQDRFTAKNSERSKFFTTIHYSFDGMAIVAGGNNNS
ICLYDVPNEVLLKRFIVSRNMALNGTLEFLNSKKMTEAGSLDLIDDAGENSDLEDRIDNS
LPGSQRGGDLSTRKMRPEVRVTSVQFSPTANAFAAASTEGLLIYSTNDTILFDPFDLDVD
VTPHSTVEALREKQFLNALVMAFRLNEEYLINKVYEAIPIKEIPLVASNIPAIYLPRILK
FIGDFAIESQHIEFNLIWIKALLSASGGYINEHKYLFSTAMRSIQRFIVRVAKEVVNTTT
DNKYTYRFLVSTDGSMEDGAADDDEVLLKDDADEDNEENEENDVVMESDDEEGWIGFNGK
DNKLPLSNENDSSDEEENEKELP
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgatttcaagttctctaaccttttaggtacggtctacaggcaaggtaacatc
accttttccgatgatggcaagcaactactctcaccggtggggaatagggtcagcgtgttt
gacttaatcaacaacaaatcgttcacgtttgaatacgagcatcgcaaaaatattgctgcc
attgatctgaacaaacaaggcacattgctgatttctattgacgaggacggtcgcgccatc
cttgtcaatttcaaagcccgtaacgtgcttcaccatttcaacttcaaagaaaaatgctcc
gctgtgaagttcagccctgatgggagactctttgcattagcctcaggcaggtttttacag
atttggaagactccagatgttaataaagacagacagtttgctcccttcgtccgccatagg
gtgcatgcgggacactttcaagacataacgtctttgacgtggtcacaagattccagattt
atccttacgacttccaaagacttaagcgcaaaaatatggtccgtagattcagaggaaaag
aaccttgcggcgacaacatttaatgggcacagagactacgttatgggtgcgttcttcagt
catgatcaggaaaaaatctacactgtaagcaaagacggtgctgtctttgtctgggaattt
accaagaggccatccgatgacgacgacaatgaaagtgaagacgacgacaagcaagaagaa
gtagatatttcgaaatacagctggagaatcacaaagaaacattttttttacgcaaaccaa
gccaaagtaaagtgtgtcaccttccatccagcaacaaggcttttagctgtcggatttact
agtggggaattccgtctttacgatttgcctgatttcactttgattcaacagctttctatg
gggcaaaacccagtcaacaccgttagcgtcaaccaaaccggcgaatggctggcgtttggt
tccagcaaactgggccaattactagtttacgaatggcaatcggaatcgtatatcttgaag
cagcagggccatttcgattccacaaatagtcttgcatactctccggatggttcacgtgta
gtgacagcatccgaagatgggaaaatcaaagtttgggacattacatcagggttttgtttg
gccacttttgaagaacacacctcttcagttactgctgtacagtttgcgaaaaggggtcag
gtcatgttctcatcatcgttagatggtacggtgagagcgtgggacttaatcaggtatcgt
aattttagaacattcactggtactgaaagaatccaattcaattgtttagcggtggatcca
tcaggtgaagtggtttgtgccgggtccctggacaattttgacattcatgtttggtccgtg
caaactggtcaattattagatgctttgtccggacatgaaggccctgtttcgtgtctttca
tttagtcaagagaacagtgtcttagcttctgcatcatgggataaaacaattagaatctgg
tccatatttggtagaagccaacaagtagaacctatagaagtttattccgatgttttagcc
ttatcaatgagaccagatggtaaagaagttgcagtatctaccttaaagggtcaaatatcc
attttcaacatagaagatgccaagcaggtgggcaacattgactgtagaaaggatataata
tctggtaggtttaatcaagataggttcactgccaaaaattctgaacgatccaaatttttt
actacaatacattacagttttgatggtatggctattgtggctggtggtaataataactcc
atttgtctatatgatgttccaaatgaagtcttgttaaaaagattcattgtgtccagaaac
atggctttgaatggtactctcgaatttttaaacagtaagaaaatgactgaagcaggttca
ttagatttgattgacgatgcaggcgaaaattcagatttggaggatcgtattgataattct
ttaccagggtctcaaagaggtggcgacctgtccacaagaaaaatgagaccagaggttaga
gttacttcggtgcaattctccccaacggcgaatgcatttgccgctgcttcaacggaaggt
ttattgatatattccaccaatgacacgatattatttgatccctttgatctggatgtggac
gtcaccccccattctactgtagaggcgctacgagaaaagcagtttttaaatgcattagta
atggcgttcaggttaaatgaagaatatttgatcaataaagtctatgaagccatacctatt
aaggaaatccccttggttgcaagtaatattcctgcaatatatttaccgaggattctgaag
ttcatcggtgattttgccattgaatcccaacacattgagtttaacctaatttggatcaaa
gctctattatctgcgagcggtggttacataaatgaacacaaatatctcttctcgacggct
atgaggtcgatacaaagatttattgttagagtggctaaggaagtagtcaataccactact
gataacaaatacacctatagatttttggtatcaactgatgggtccatggaagatggcgcg
gctgatgatgacgaggttctattaaaagatgacgcagatgaagataacgaagagaacgaa
gagaacgatgtagtcatggaatctgacgacgaggaaggatggattggtttcaatgggaag
gataacaaattacccttgtctaatgaaaatgattccagtgatgaagaagaaaatgagaaa
gagcttccttga
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