Saccharomyces cerevisiae (budding yeast): YCR092C
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Entry
YCR092C CDS
T00005
Symbol
MSH3
Name
(RefSeq) mismatch repair protein MSH3
KO
K08736
DNA mismatch repair protein MSH3
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YCR092C (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sce03400
]
YCR092C (MSH3)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
YCR092C (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
MutS_IV
AAA_14
Nse4-Nse3_bdg
Motif
Other DBs
NCBI-GeneID:
850454
NCBI-ProteinID:
NP_010016
SGD:
S000000688
UniProt:
P25336
LinkDB
All DBs
Position
III:complement(276764..279820)
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AA seq
1018 aa
AA seq
DB search
MAGQPTISRFFKKAVKSELTHKQEQEVAVGNGAGSESICLDTDEEDNLSSVASTTVTNDS
FPLKGSVSSKNSKNSEKTSGTSTTFNDIDFAKKLDRIMKRRSDENVEAEDDEEEGEEDFV
KKKARKSPTAKLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPG
KLTIDESNPQDCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGAS
KSSVFERKISNVFTKATFGVNSTFVLRGKRILGDTNSIWALSRDVHQGKVAKYSLISVNL
NNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVNTDDLPLHVAKFFKDISCPLIHKQEY
DLEDHVVQAIKVMNEKIQLSPSLIRLVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLL
DPNSLQSLDIFTHDGGKGSLFWLLDHTRTSFGLRMLREWILKPLVDVHQIEERLDAIECI
TSEINNSIFFESLNQMLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQSY
LSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTQLPHFLTMINVSAVMEKNSDKQVMDFF
NLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRDEVDYLIEVKNSQIKD
LPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYTELRK
ITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAKNARNPIIESLDVHYVPNDIMMS
PENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTRIGAHDDI
INGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFSELSDCPL
ILFTTHFPMLGEIKSPLIRNYHMDYVEEQKTGEDWMSVIFLYKLKKGLTYNSYGMNVAKL
ARLDKDIINRAFSISEELRKESINEDALKLFSSLKRILKSDNITATDKLAKLLSLDIH
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacaacccacaataagcaggtttttcaagaaggcggtaaaatcagagctgacg
cataagcaagaacaagaagttgcggttggaaatggcgctggtagcgaatccatctgcctt
gacactgatgaagaggacaatttatcttctgttgcaagcacaacagtaactaatgatagc
tttccactcaaaggcagtgtttcttccaagaattcgaaaaattcagaaaagactagtggt
acttcgacaacatttaatgatattgactttgctaagaaattggataggattatgaaaaga
cgaagtgatgaaaatgttgaggctgaagatgatgaggaagagggtgaggaagatttcgta
aaaaaaaaagccagaaagtcccctacagcgaaacttactcccttggacaaacaggtgaag
gacctgaaaatgcatcatagagataaagtgcttgttattagagtaggctacaagtacaaa
tgttttgcagaggatgcagtaacggttagcagaatacttcacatcaaacttgtgcctgga
aaattgactatcgatgagtctaatcctcaagattgcaatcataggcagtttgcgtactgt
tctttcccggatgtcagattaaacgttcacctagagagacttgtgcatcataatttaaag
gttgccgtggtagagcaagcagaaacaagcgctattaagaagcatgatccaggtgccagc
aaatcaagcgtttttgaaagaaagatttcaaatgtctttaccaaagctacatttggtgtt
aattccacctttgtccttagggggaaacgtattctcggtgatacaaacagtatatgggct
ttgtcccgtgacgtacatcagggaaaggtggctaaatattccttaatttctgtcaattta
aataacggggaagtcgtgtatgatgaatttgaagagcctaatcttgctgatgagaaacta
cagatacgaatcaaatatttacagcccatagaagtactggtaaatacagatgatcttcca
ttacatgtagcgaaatttttcaaagatatttcatgtcctttaatacacaagcaggagtat
gatttggaagatcatgtagttcaggcaataaaagtaatgaatgagaaaattcaactctcg
ccgtctctcatacgcttagtttctaagttatattcgcatatggttgagtacaataatgag
caggtgatgttgattccttctatctattcgcccttcgcatcaaaaatacatatgttactt
gatcctaactccctgcaaagtttggacatttttacccatgatggtggtaaaggttctttg
ttttggttattggaccatacaaggacatcgtttggattaagaatgttgagagaatggatt
ctcaaacctttggttgatgtacaccaaattgaagagcggcttgatgccattgagtgcatt
acatccgaaatcaacaacagtatattttttgaatcgttgaatcaaatgttgaatcatacc
cctgacttattaagaactttaaatcgcataatgtatggtacaacttctagaaaagaagtc
tatttctatttaaagcaaataacttctttcgttgatcacttcaagatgcatcaatcttac
ctgtcagaacatttcaagtcatcagatggaaggataggcaaacaatctcctttacttttt
agactatttagtgaattgaatgaactactttctaccactcagttgcctcattttttgacc
atgatcaacgtttctgcggtaatggaaaaaaattcagataagcaagtaatggattttttt
aatttaaataactatgattgttcagagggtataataaaaattcaaagggaaagcgaatca
gtacggtcacagttaaaggaagaattggcagaaatacgaaaatatctcaaacgtccatat
ctaaattttagagatgaagttgattacttaatcgaagtgaaaaactcgcaaattaaggac
ttgccagatgattggataaaagttaacaatacgaagatggtcagtagatttaccactccc
agaacccagaaactgactcaaaagctagaatattacaaggacttattaattcgggaatct
gaactacagtataaagaattcttgaacaaaattacggcagaatatacagagctccgtaaa
attacactcaatttggcgcagtatgactgtattttgtcgttagcagccacatcatgcaac
gtaaattatgttagaccaacttttgtgaatggtcaacaagccataatcgcaaaaaatgca
agaaatccaattatcgagtcgctggatgttcattatgtaccaaatgatatcatgatgtcc
ccagaaaacggtaaaatcaatattataacggggccgaatatgggtgggaaatcatcttat
attagacaagtggcactgcttactataatggcacagatcggctcatttgtccccgcagaa
gagatcagattaagcatatttgaaaacgtactcactcgaatcggtgcgcacgatgatatt
ataaacggtgattctacttttaaagtggaaatgcttgatatcctacacatcttgaaaaat
tgcaataaacggtctttactattattagacgaagtgggaagaggtactggcacgcacgat
ggtatagcaatttcttatgctttaataaagtatttttctgagttaagtgactgccccttg
atattatttactacccattttcccatgctgggagaaatcaaatctccgttaataaggaat
tatcatatggattacgtggaagaacaaaaaactggcgaggactggatgagtgtaattttt
ctatataagttaaaaaagggattgacttataatagttatgggatgaatgtggcgaaattg
gcacgcctggacaaagatattataaatcgggcattcagtatttcagaagaattgcggaag
gaatccattaacgaagacgcgttgaaattattcagctctttgaaaagaatattaaaaagt
gataatataacagcaacggataaactcgcgaaattactatcattggatatccactga
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