Saccharomyces cerevisiae (budding yeast): YDL088C
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Entry
YDL088C CDS
T00005
Symbol
ASM4, NUP59
Name
(RefSeq) FG-nucleoporin ASM4
KO
K18717
nucleoporin ASM4
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
YDL088C (ASM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YDL088C (ASM4)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
YDL088C (ASM4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
851470
NCBI-ProteinID:
NP_010195
SGD:
S000002246
UniProt:
Q05166
Structure
PDB
PDBj
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All DBs
Position
IV:complement(298417..300003)
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AA seq
528 aa
AA seq
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MFGIRSGNNNGGFTNLTSQAPQTTQMFQSQSQLQPQPQPQPQQQQQHLQFNGSSDASSLR
FGNSLSNTVNANNYSSNIGNNSINNNNIKNGTNNISQHGQGNNPSWVNNPKKRFTPHTVI
RRKTTKQNSSSDINQNDDSSSMNATMRNFSKQNQDSKHNERNKSAANNDINSLLSNFNDI
PPSVTLQDWQREDEFGSIPSLTTQFVTDKYTAKKTNRSAYDSKNTPNVFDKDSYVRIANI
EQNHLDNNYNTAETNNKVHETSSKSSSLSAIIVFGYPESISNELIEHFSHFGHIMEDFQV
LRLGRGINPNTFRIFHNHDTGCDENDSTVNKSITLKGRNNESNNKKYPIFTGESWVKLTY
NSPSSALRALQENGTIFRGSLIGCIPYSKNAVEQLAGCKIDNVDDIGEFNVSMYQNSSTS
STSNTPSPPNVIITDGTLLREDDNTPAGHAGNPTNISSPIVANSPNKRLDVIDGKLPFMQ
NAGPNSNIPNLLRNLESKMRQQEAKYRNNEPAGFTHKLSNWLFGWNDL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaatacgttcaggcaataataacggtggatttactaacctcacgtcgcaagca
ccacagacaacccagatgtttcaatcgcaatcacagttgcagccacaaccgcaaccgcaa
ccacaacaacagcagcaacacttgcaattcaatggatcatccgatgcaagttctttacga
tttggaaactcactttccaatactgtaaacgccaataactatagtagtaatatcggtaac
aatagcatcaacaacaacaacattaaaaacggcacaaataacataagccaacatggccaa
gggaataatcctagctgggtgaataatcctaaaaagagattcactcctcatacggtgata
agaaggaagacaacaaagcaaaattcttcttctgacatcaaccagaatgatgattcatct
tctatgaacgctactatgagaaatttcagtaagcaaaatcaagattccaagcataatgaa
agaaataagtctgcggcaaataatgacatcaattctctgttgtcaaattttaacgatatt
ccaccctccgttactttacaggattggcaacgcgaggatgaattcggttctattccatca
ttaacaactcagtttgttaccgacaaatacacggcgaagaaaacaaataggtcagcttat
gattccaaaaatactccaaatgtttttgataaagactcttatgttagaatagcaaacatt
gaacagaaccatttagataataattacaacaccgccgaaacaaacaataaagtccatgaa
acatcttccaagtcttctagtttgagcgcaattatcgtatttggctatcctgaatcaatt
tccaatgaattgattgaacacttctcccatttcggtcatattatggaagactttcaagta
ttgcgattgggtcgcgggattaaccccaacaccttcagaatattccataatcatgataca
ggctgtgatgaaaacgattctactgttaataaatctattactttaaaaggcagaaataat
gagtcgaataacaaaaaatatccaatatttactggtgaaagttgggtcaaactcacttat
aattctccatcttctgctttgagagcactgcaggaaaatggaaccatatttcgcggttct
ttgattggttgcatcccatattcaaaaaatgcggtggagcaattagctggctgcaaaatt
gataatgtcgacgacattggagaattcaacgtttctatgtatcaaaattcctccacatcg
tcgacatctaatacaccatccccaccaaacgtaataataactgatggcactcttctgagg
gaagacgataatactcctgccggtcatgctggtaatccaacaaatatttcaagtccaata
gtagcaaattctccgaataagcggctggatgtaatagatggcaaattgccattcatgcaa
aatgcaggaccgaattcgaatattcctaatctgttgcgaaacctagaatcgaaaatgcgt
cagcaagaagcgaaatacagaaataatgaacctgctggttttacgcacaaactgagtaat
tggttatttggttggaatgacctataa
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