Saccharomyces cerevisiae (budding yeast): YDL140C
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Entry
YDL140C CDS
T00005
Symbol
RPO21, RPB1, RPB220, SIT1, SUA8
Name
(RefSeq) DNA-directed RNA polymerase II core subunit RPO21
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03020
RNA polymerase
sce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
YDL140C (RPO21)
09124 Replication and repair
03420 Nucleotide excision repair
YDL140C (RPO21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YDL140C (RPO21)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YDL140C (RPO21)
Enzymes [BR:
sce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
YDL140C (RPO21)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
YDL140C (RPO21)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
YDL140C (RPO21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
851415
NCBI-ProteinID:
NP_010141
SGD:
S000002299
UniProt:
P04050
Structure
PDB
LinkDB
All DBs
Position
IV:complement(205360..210561)
Genome browser
AA seq
1733 aa
AA seq
DB search
MVGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETMDETQTRAKIGGLNDPRLGS
IDRNLKCQTCQEGMNECPGHFGHIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNE
LMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQLVSRGGCGNTQPTIRKDGLK
LVGSWKKDRATGDADEPELRVLSTEEILNIFKHISVKDFTSLGFNEVFSRPEWMILTCLP
VPPPPVRPSISFNESQRGEDDLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHV
ATYMDNDIAGQPQALQKSGRPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLE
LDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRDSGDRIDLRYSKR
AGDIQLQYGWKVERHIMDNDPVLFNRQPSLHKMSMMAHRVKVIPYSTFRLNLSVTSPYNA
DFDGDEMNLHVPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQDTLCGIRKLTLRDTF
IELDQVLNMLYWVPDWDGVIPTPAIIKPKPLWSGKQILSVAIPNGIHLQRFDEGTTLLSP
KDNGMLIIDGQIIFGVVEKKTVGSSNGGLIHVVTREKGPQVCAKLFGNIQKVVNFWLLHN
GFSTGIGDTIADGPTMREITETIAEAKKKVLDVTKEAQANLLTAKHGMTLRESFEDNVVR
FLNEARDKAGRLAEVNLKDLNNVKQMVMAGSKGSFINIAQMSACVGQQSVEGKRIAFGFV
DRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRR
LVKALEDIMVHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQSLDTIGGSDAAFEKRYRVD
LLNTDHTLDPSLLESGSEILGDLKLQVLLDEEYKQLVKDRKFLREVFVDGEANWPLPVNI
RRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEIIQNAQRDAVTLFCC
LLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIGEPATQMT
LNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYLEPGHAADQEQAKLIRSAIEH
TTLKSVTIASEIYYDPDPRSTVIPEDEEIIQLHFSLLDEEAEQSFDQQSPWLLRLELDRA
AMNDKDLTMGQVGERIKQTFKNDLFVIWSEDNDEKLIIRCRVVRPKSLDAETEAEEDHML
KKIENTMLENITLRGVENIERVVMMKYDRKVPSPTGEYVKEPEWVLETDGVNLSEVMTVP
GIDPTRIYTNSFIDIMEVLGIEAGRAALYKEVYNVIASDGSYVNYRHMALLVDVMTTQGG
LTSVTRHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGA
FDVMIDEESLVKYMPEQKITEIEDGQDGGVTPYSNESGLVNADLDVKDELMFSPLVDSGS
NDAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENSR
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggtaggacaacagtattctagtgctccactccgtacagtaaaagaggtccaattcggt
cttttctcacctgaagaagttagagcaatcagtgtggccaaaattagatttccagagaca
atggatgaaacccagacgagagcgaaaattggtggtctaaacgaccctaggttaggctct
attgatcgtaatctgaagtgtcaaacttgtcaagagggtatgaacgaatgtcctggtcat
tttggtcacatagatttagcaaaacctgtatttcatgttggttttattgccaaaattaag
aaagtatgtgagtgtgtctgtatgcactgtggtaagctattactggatgaacataatgaa
ttaatgagacaagctctagcaatcaaagacagtaaaaaaaggtttgctgcaatttggact
ttatgtaaaacaaaaatggtctgcgaaacagatgtcccttctgaagatgatcctactcag
ctcgtatcaaggggaggttgtggtaatacacagcctacaattcgtaaggatgggttgaaa
ttagttggtagttggaaaaaagatagagccacgggggatgcggatgaaccagaactaaga
gttttaagtacggaggaaatcttgaatatttttaagcatatctcagtaaaagacttcact
agtttgggtttcaacgaagttttttctcgtccagaatggatgattttaacatgccttcct
gtcccaccaccaccggtgcgtccatccatttccttcaatgaatctcaaagaggtgaggat
gatttaacctttaaacttgctgatattttaaaagctaatattagtttggaaacactagag
cataacggtgctccacatcatgctattgaagaagcagagagtttattacaatttcatgtt
gccacttatatggataatgatattgctggtcaaccacaagctcttcaaaagtccggccgt
cccgttaaatctattcgtgctcgtttgaagggtaaagagggtcgtatcagaggtaattta
atgggtaagcgtgtggatttttcggcaagaactgttatttctggtgatcctaatttggaa
ttagaccaagtcggtgttccaaaatctattgccaagactttaacatacccagaagtggtc
acaccatataacatagatcgtctgacgcaacttgttaggaatggaccaaatgagcacccc
ggtgccaaatacgtcattcgtgatagcggagaccgtatagatttaagatacagtaaaagg
gcaggtgatattcaattacagtatgggtggaaagttgaacgtcatattatggacaatgat
ccagttttattcaaccgtcaaccttcgttgcacaaaatgtccatgatggcccacagagta
aaagttattccatattctacatttagattgaatttgtccgttacatctccatacaatgcc
gatttcgacggtgacgaaatgaatcttcacgttcctcagtctgaggaaacaagggcggaa
ctttctcaattatgtgctgttcctctgcaaattgtttcaccacaatctaacaaaccttgt
atgggtattgttcaagatactttgtgtggtattcgtaaactgacattaagagatacattt
atagaacttgatcaagttttgaatatgctttattgggttccagattgggatggtgttatt
ccgacacctgcaattatcaagcccaaacctttgtggtccggtaaacaaatcttgtctgtg
gctatcccaaacggtattcatttacaacgttttgatgagggcactactctgctttctcca
aaggataatggtatgcttattattgacggtcaaatcatttttggtgtagtagagaaaaaa
accgttggttcctccaatggtggtttaattcatgttgttacgagagaaaagggacctcaa
gtttgtgctaagttgtttggtaacatacagaaagttgttaacttttggttactacataat
gggttttcaacaggtattggtgataccattgcggacggcccaacaatgagggaaattaca
gagacaattgcagaggctaaaaagaaagttttggatgttacgaaagaagcccaggcaaac
ttattgactgctaaacatggtatgactctccgtgagtcttttgaggataacgttgttcgg
ttcctaaatgaagcaagagataaggcaggtcgtttagctgaagtcaatttgaaagatttg
aacaatgtgaaacaaatggttatggcaggttccaagggttcatttattaatatcgcgcaa
atgtcagcttgtgtaggacagcaatctgttgaaggtaaacgtattgcttttgggttcgtt
gatcgtaccttacctcatttctctaaagatgattactccccagagtctaaaggttttgtt
gagaactcatatttgagaggtttgaccccacaagaattttttttccatgcaatgggtggt
cgtgaaggtcttatcgataccgccgtcaaaacagccgaaacaggttatattcaacgtcgt
ttagtgaaagctctagaagatatcatggttcattacgataacaccacaagaaactcattg
ggtaacgttattcagtttatttatggtgaagatggtatggatgctgcgcatattgaaaag
caatcgctagatactattggtggctccgatgcagcttttgaaaagagatacagagttgat
ttattgaatacagaccatacccttgatccctcactattggaatccggatctgagatactt
ggcgatttgaaacttcaagttctcctggatgaagaatacaaacaattagtgaaagatcgt
aaatttttgagggaagtttttgttgatggtgaagcaaactggccattaccagtcaacata
agacgtattattcaaaatgctcaacaaactttccacatagatcatacgaaaccatctgat
ttaacaatcaaagacatcgttcttggtgtaaaggatttgcaagaaaacttattagtgttg
cgtggtaagaatgaaattatacaaaatgcccagcgagatgcagttacattgttctgctgt
ttattacgttcccgtttggccacacgtagagttctacaagagtacagactaacaaaacag
gcattcgattgggtattaagtaatatcgaggcacaattcctccgttctgttgttcaccct
ggtgaaatggttggtgttctagcagcccaatccattggtgaaccagccacacaaatgacc
cttaacaccttccattttgctggtgttgcttccaaaaaagttacttctggtgtcccccgt
ttaaaggaaattttgaatgtggccaaaaacatgaaaaccccttccttgactgtatactta
gagcctggtcatgctgccgatcaagaacaagcgaagttgatcagatctgctatcgagcat
accactttaaagagtgtcactattgcttcagaaatttactatgatcctgatccacgttcc
acagttattccagaagatgaagaaattatccaacttcatttctcattattggatgaagag
gctgaacaatcttttgaccaacaatcaccttggttattacgtctggaactggatcgtgca
gcaatgaatgataaagacttaacaatgggtcaggttggtgaaagaatcaagcaaacattc
aaaaatgatttgtttgttatctggtctgaagacaacgatgagaagttgatcatccgttgt
cgtgttgttcgtccaaagtcactagatgctgagactgaagcagaagaagatcatatgttg
aagaaaattgagaacacaatgttagagaatattacattacgtggtgtagagaacatcgag
cgtgttgtcatgatgaaatatgaccgtaaagtaccaagtccaactggtgaatacgttaag
gaacctgaatgggtgttggaaacagatggtgttaacttatctgaagttatgactgttcct
ggtatcgacccaaccagaatctataccaactccttcattgatataatggaagttctaggt
attgaagctggtcgtgcagccttgtataaagaagtttacaatgttattgcttctgatggt
tcgtatgttaactaccgtcatatggctttgttagtcgatgttatgacaacccaaggtggc
ttaacttctgttactcgtcatggtttcaacagatcaaatacaggtgccttaatgagatgt
tcatttgaagaaactgtcgaaattttgtttgaagctggtgcttcagccgaattagatgat
tgtcgtggtgtttcggaaaatgtcattcttggtcaaatggctccaatcggtaccggtgca
tttgatgtgatgatcgatgaggagtcactggtaaaatacatgccagaacaaaaaataact
gagattgaagacggacaagatggtggcgtcacaccatacagtaacgaaagtggtttggtc
aatgcagatcttgacgttaaagatgagctaatgttttcacctctggttgattcgggttca
aatgacgctatggctggaggatttacagcgtacggtggtgctgattatggtgaagccacg
tctccatttggtgcttatggtgaagcacctacatctcccggatttggagtctcctcacca
ggcttttctccaacttccccaacatactctcctacctctccagcgtactcaccaacatca
ccatcgtactcaccaacatcaccatcgtactcgccaacatcaccatcgtactcacctaca
tcaccatcgtattcaccaacgtcaccatcatattcgccaacgtcaccatcatattcgcca
acgtcgccatcgtattctccaacgtcaccatcgtattcgccaacgtcgccttcctactct
cccacgtcgccaagctacagccctacgtctccttcttattctcctacatctccatcatac
tctcctacgtcaccaagttacagcccaacgtcaccaagttacagcccaacgtctccagcc
tattccccaacatcaccaagttatagtcctacatcgccttcatactctccaacatcacca
tcctattccccaacatcaccttcttactctcccacctctccaaactatagccctacttca
ccttcttactccccaacatctccaggctacagcccaggatctcctgcatattctccaaag
caagacgaacaaaagcataatgaaaatgaaaattccagatga
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integrated database retrieval system
