Saccharomyces cerevisiae (budding yeast): YDL145C
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Entry
YDL145C CDS
T00005
Symbol
COP1, RET1, SEC33, SOO1
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YDL145C (COP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sce04147
]
YDL145C (COP1)
Membrane trafficking [BR:
sce04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
YDL145C (COP1)
Exosome [BR:
sce04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
YDL145C (COP1)
Exosomal proteins of bladder cancer cells
YDL145C (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
TPR_COPA_B
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Nup120_160
eIF2A
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
TPR_1
EFF-AFF
DUF4309
Motif
Other DBs
NCBI-GeneID:
851410
NCBI-ProteinID:
NP_010136
SGD:
S000002304
UniProt:
P53622
Structure
PDB
PDBj
LinkDB
All DBs
Position
IV:complement(194571..198176)
Genome browser
AA seq
1201 aa
AA seq
DB search
MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD
FHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIR
IWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSS
FEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSA
TKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWL
IAAHPHINLFGAAHDSGIMVFKLDRERPCSFIHQNQLFFVNAEKQIQSFNFQKRVASLPY
ASLKGIGQPWDAFRSISYNPSQHSVLVNEANGKFALVILPKQPVGAVEPTSVTQDTGNFA
TFVGRNRFVVYNKNTESVEVRSLENKVTRNIKVEETVRTIVAAGPGSVLVIHPREVILYD
VQQGKKVSQLAVKNVKYVSWSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSAAWD
ETGVLIYSTLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNREGEIEILTIDPTE
YRFKKALVNKNFPEVLRLIKDSNLVGQNIISYLQKSGYPEIALQFVQDPHIRFDLALEYG
NLDVALDEAKKLNDSSTWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKL
SKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANGDEAAASAFLE
QAEVDEQDVTLPDQMDASNFVQRPVISKPLEKWPLKEAELSYFEKAVLGQIDDLTIDDET
PAVNTTQEQEEPLGEENFNDEDIGEDEGAWDLGDEDLDVGEELPEEVEQGEITSPAQEVE
TAIWIKNSKLPAVLVAAGAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCE
LPAQLGYVRAYDDTVSEDQILPYVPGLDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRI
TLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYFTKAKLSPI
HRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQARKIKNKADSMASDAIPID
FDPYAKFDICAATYKPIYEDTPSVSDPLTGSKYVITEKDKIDRIAMISKIGAPASGLRIR
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttaactaaatttgaatcaaagtccactagggccaagggcattgccttccac
ccctccagaccttgggttttggtggctttgttttcctctactattcaattatgggattac
aggatgggaacactacttcacagatttgaagaccacgagggccctgttcgtgggctagat
ttccatccaacccaaccgatttttgtttcggcaggtgacgactataccattaaagtttgg
tccttagatactaacaaatgtctatacaccttaactgggcatttggattatgtccgtacc
gtgtttttccaccgtgagctgccttggatcatatctgcttctgatgaccagaccataaga
atctggaactggcaaaaccgtaaggaaattgcatgtttgaccggccacaatcattttgtc
atgtgtgctcaatttcatccaaccgatgacctgatcgtttccgcttctctggatgaaacc
atcagaatttgggatatttccggtttaaggaaaagacactccgctcctggtactagttca
tttgaggagcaaatgagtgcacaacaaaatctattggatggctctcttggtgactgtgtt
gtcaagtttattctagagggtcacacaagaggtgtcaactgggcctctttccatccaact
ttaccattgattgtctccggcagtgacgaccgtcaagttaaattatggagaatgagtgct
acgaaagcttgggaagttgatacttgcagaggtcacactaacaatgttgatagtgttatc
tttcacccacatcaaaacttgatcatttctgtcggtgaagacaaaacgctaagggtttgg
gatcttgacaagagaactccagtaaagcaattcaaaagagaaaacgatagattttggttg
attgcagcacatcctcatatcaatctatttggtgcagctcacgattctggtattatggtt
ttcaagctcgatcgcgaaagaccatgcagctttatccatcaaaaccagttgttttttgtc
aatgcggaaaagcaaatccaaagtttcaatttccagaaaagagtcgcttcattaccttat
gcgtccttaaagggtattggtcaaccttgggatgcattcagaagtatatcgtacaatccc
tcccaacattcagttttggttaatgaagctaatggcaaatttgctctcgttattttacca
aaacaaccagttggagctgtggagccaacaagtgtcacccaagatacaggtaattttgct
acttttgttggtcgtaatagatttgttgtttacaacaagaacactgaatctgttgaagtt
cgctctctcgaaaacaaagttacaagaaatatcaaagtagaggaaacagtaagaactatt
gtagctgcaggtcctggatctgttttggtcatacaccccagagaagttattctttatgat
gtccaacagggcaaaaaagtatcccaattggctgttaaaaacgtcaagtacgtttcgtgg
tccttagatggtcaatatgttgcattgatgagtaagcacaccataactttggctaccaaa
aagctagaattgattaattctatgcatgaaacgattagaatcaaaagtgccgcttgggat
gaaactggtgtattaatttattcaactttaaatcatataaggtactcactattgaacggg
gatagaggtattattaaaactttggagaaaactttatatatcacaaaagttcagggaaaa
ttagtgtactgcttgaaccgtgaaggtgagattgaaattttaaccattgatcctacagaa
tatcgcttcaaaaaggccctggttaacaaaaatttcccagaagttttacgtctgataaaa
gattctaatttggttggccagaatatcatttcctatctgcagaagtcaggttacccagaa
attgctttacaattcgttcaagacccacatatccgttttgatttagctttggaatacggt
aatttggatgttgccttagatgaagccaaaaaactgaatgattctagtacttgggaaaga
ttaatccaagaagccttggcacaaggtaatgccagcttagctgaaatgatttatcaaact
caacattcttttgacaaactttccttcctgtatttagttacaggtgacgttaacaaacta
tctaaaatgcaaaatatcgctcagactcgtgaagactttggaagtatgctattaaacacc
ttttacaacaattcaaccaaggaaagatctagcatttttgcagagggcggctctttacca
ttagcttatgccgtagcaaaggctaacggagatgaagcggctgcttctgctttcttggag
caagctgaagttgatgaacaagatgttactttaccagaccagatggatgcctccaacttc
gttcaaagaccagtgatctcaaagccacttgaaaaatggccattaaaagaggctgaacta
tcttactttgaaaaggctgttttaggtcaaattgacgatttgactatagacgatgaaact
ccagcagtaaacaccactcaagagcaagaagaaccactaggcgaagaaaactttaacgat
gaggatattggtgaagacgaaggtgcctgggatttgggtgacgaagatttggatgtggga
gaagagttacctgaagaagttgagcaaggcgaaattacctctccagcacaggaagttgaa
acagccatttggatcaagaattctaaactgcctgctgtcctagttgccgctggtgccttt
gatgccgctgttcaagccttgagcaagcaagtgggtgtagtcaagctggagccattgaag
aaatattttaccaacatttatgagggttgtagaacatacattcctagtacgccctgtgaa
cttcctgctcaattaggttatgtcagagcgtatgatgataccgtaagtgaagatcaaatt
cttccttacgtgccaggtcttgatgtcgttaatgaaaaaatgaatgagggttacaaaaac
tttaaactaaacaaaccagatattgcaatcgaatgcttcagagaagctatctaccgtatt
acgctattaatggtcgatgatgctgaagatgaaaaattagcacacaagatactggaaact
gctagggagtatatattaggtttatccattgaattggaacgccgctcattaaaggaggga
aatactgtacgcatgcttgagctagctgcatactttacaaaggcaaaactatccccaatt
catcgtaccaatgctttacaagtggctatgtcccaacatttcaaacacaaaaatttctta
caggcctcatattttgccggtgaatttttaaagattatttcttctggtcctcgtgcagaa
caagcacgtaaaatcaaaaacaaagccgactcaatggccagtgacgccattccaattgac
tttgatccttatgctaaattcgatatttgtgcagccacctacaaaccaatttatgaagat
acaccttccgtttctgacccattaacaggtagtaaatacgttatcacggaaaaagataaa
atagatagaattgctatgatttctaagatcggtgcacctgcatccggattaagaatacgt
gtataa
DBGET
integrated database retrieval system
