Saccharomyces cerevisiae (budding yeast): YDL160C
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Entry
YDL160C CDS
T00005
Symbol
DHH1
Name
(RefSeq) DExD/H-box ATP-dependent RNA helicase DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YDL160C (DHH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YDL160C (DHH1)
03036 Chromosome and associated proteins [BR:
sce03036
]
YDL160C (DHH1)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YDL160C (DHH1)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
YDL160C (DHH1)
mRNA degradation factors
5'-3' decay
Decapping complex
YDL160C (DHH1)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Gene silencing
piRNA pathway
YDL160C (DHH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Phage_integrase
Motif
Other DBs
NCBI-GeneID:
851394
NCBI-ProteinID:
NP_010121
SGD:
S000002319
UniProt:
P39517
Structure
PDB
PDBj
LinkDB
All DBs
Position
IV:complement(170410..171930)
Genome browser
AA seq
506 aa
AA seq
DB search
MGSINNNFNTNNNSNTDLDRDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMG
IFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIM
VPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLAS
RKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKH
LHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLA
KKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDF
PKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATIDKSLYVA
ENDETVPVPFPIEQQSYHQQAIPQQQLPSQQQFAIPPQQHHPQFMVPPSHQQQQAYPPPQ
MPSQQGYPPQQEHFMAMPPGQSQPQY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggttccatcaataataacttcaacactaataataacagtaatacggatctcgatcgg
gactggaaaactgcattgaatattcccaagaaggataccagaccacagacagatgatgtc
ttaaatacaaagggtaatacttttgaagatttttatttgaaaagagagctgttaatgggt
atttttgaagccggttttgaaaaaccatcccctattcaagaagaggctattccggtagca
ataactggtagagacatattggccagagcaaagaatggtacaggtaagacagccgcattt
gttattcctacgttagagaaagtcaaaccaaagttgaataaaattcaggctttgatcatg
gttcccacaagagagttagctctgcaaacttcccaagtcgtccgtacattgggaaaacac
tgtggtatttcatgtatggtgaccactggtggtaccaatttgagagacgatattctaaga
ttaaatgaaacagtccatattttggttggtactcctggtagagtgttggatttagcttcg
agaaaagtagcagatctgtctgattgttcattattcatcatggacgaagccgataaaatg
ttatctcgtgacttcaagacaataattgaacaaatcttatccttcttacctccaactcac
caatctttattatttagcgctactttcccactaacggttaaggaattcatggttaaacat
ctgcataagccttatgaaattaatttgatggaagaattgactctaaagggtattactcaa
tactacgcctttgttgaagaaagacaaaagctacattgtttaaatactttattctctaag
cttcaaattaatcaagccattattttttgtaattctactaaccgtgtcgaattactagcc
aagaaaatcactgatttaggctattcctgttattactctcatgcaagaatgaagcaacaa
gaaagaaataaagttttccacgaatttcgtcaaggtaaggttcgtacattggtctgctcc
gatttattgacccgtggtatcgatattcaagccgttaatgtcgttatcaatttcgatttc
cccaaaacggcagaaacatatttacatcgtattggtagatccggtaggtttggccacttg
ggtttagcaatcaatttgattaactggaatgatcggtttaacctttataaaatcgaacaa
gaactgggcactgaaattgcggctattccggccactatcgataagtcattgtatgtggct
gaaaatgacgaaacggtacctgtcccattcccgatagagcaacagagctatcatcaacaa
gcgatacctcagcaacaattaccatctcagcaacaatttgctattcctccgcagcaacat
catccacaattcatggttcctccttcgcatcagcaacaacaggcgtatcctccaccgcaa
atgccatcgcagcaggggtatcctccacagcaggaacatttcatggcgatgccacctggt
cagtcacaaccccagtattaa
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