Saccharomyces cerevisiae (budding yeast): YDR021W
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Entry
YDR021W CDS
T00005
Symbol
FAL1
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013
Nucleocytoplasmic transport
sce03015
mRNA surveillance pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YDR021W (FAL1)
09122 Translation
03013 Nucleocytoplasmic transport
YDR021W (FAL1)
03015 mRNA surveillance pathway
YDR021W (FAL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YDR021W (FAL1)
03041 Spliceosome [BR:
sce03041
]
YDR021W (FAL1)
03009 Ribosome biogenesis [BR:
sce03009
]
YDR021W (FAL1)
03012 Translation factors [BR:
sce03012
]
YDR021W (FAL1)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YDR021W (FAL1)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
YDR021W (FAL1)
mRNA cycle factors
Stress granule specific factors
YDR021W (FAL1)
Spliceosome [BR:
sce03041
]
Complex C
Other components
EJC/TREX
YDR021W (FAL1)
Ribosome biogenesis [BR:
sce03009
]
Eukaryotic type
90S particles
Helicases
YDR021W (FAL1)
Translation factors [BR:
sce03012
]
Eukaryotic type
Initiation factors
eIF-4
YDR021W (FAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Helicase_RecD
CobA_CobO_BtuR
TniB
CMS1
Flavi_DEAD
DUF6718
Motif
Other DBs
NCBI-GeneID:
851584
NCBI-ProteinID:
NP_010304
SGD:
S000002428
UniProt:
Q12099
LinkDB
All DBs
Position
IV:486804..488003
Genome browser
AA seq
399 aa
AA seq
DB search
MSFDREEDQKLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISG
KDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNV
NAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLS
ETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIK
QYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMK
QEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFG
RKGVAINFITKADLAKLREIEKFYSIKINPMPANFAELS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgacagagaagaagaccaaaaattgaagtttaaaacatcgaaaaaattaaag
gtgtcttctacttttgaaagcatgaatctaaaagatgacttacttcgaggaatatactca
tacggttttgaagcaccatcctctatccaatcaagggctattacacagattatttcgggc
aaggacgttatagcacaagcacaatcaggtacaggtaagacagcaacttttacaatcggc
cttttacaagctattgatttaaggaagaaagatttacaagctctaatactatctccaaca
cgtgaattagcaagccaaattgggcaagtagtaaaaaatctaggggattatatgaatgtc
aatgcatttgccattacaggtggtaaaactttgaaagacgacctgaagaaaatgcaaaag
catggttgccaggccgttagcggaacaccaggaagagtattagacatgattaagaaacaa
atgttgcaaacaagaaatgttcaaatgttagttttagatgaggctgatgaattattgagt
gagacactaggtttcaagcaacaaatatacgatatttttgcaaaattgcctaaaaattgc
caagttgttgttgtcagcgcaacaatgaataaggacattttagaagtaaccagaaaattt
atgaatgatccagttaaaatcctagtgaagagggatgaaatatcacttgaaggtatcaaa
caatatgtcgttaatgttgacaaagaagagtggaaattcgatactctgtgtgatatatac
gattctttgaccattacacaatgtgtgatattctgtaacaccaagaaaaaagtagattgg
ttatctcagcggctaatccaatcaaactttgctgtagtctccatgcatggtgatatgaaa
caagaagaaagagataaagtaatgaatgattttagaacaggtcattctcgtgtactgata
tcgacggatgtttgggcgcgcggtattgatgtccaacaagtttctttagtcattaactat
gacctaccagaaataatagaaaattacatccatcgtatcggtagaagtggtcgatttggt
agaaagggtgtggctataaacttcattaccaaagctgatttagcaaaacttagagaaatt
gaaaaattctattctatcaaaataaatccgatgccagcaaattttgcagaattatcataa
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