Saccharomyces cerevisiae (budding yeast): YDR030C
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Entry
YDR030C CDS
T00005
Symbol
RAD28
Name
(RefSeq) Rad28p
KO
K10570
DNA excision repair protein ERCC-8
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03420
Nucleotide excision repair
sce04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
YDR030C (RAD28)
09124 Replication and repair
03420 Nucleotide excision repair
YDR030C (RAD28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sce04121
]
YDR030C (RAD28)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YDR030C (RAD28)
Ubiquitin system [BR:
sce04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
YDR030C (RAD28)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
YDR030C (RAD28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_DCAF4
WD40_RFWD3
Hira
Motif
Other DBs
NCBI-GeneID:
851594
NCBI-ProteinID:
NP_010313
SGD:
S000002437
UniProt:
Q12021
LinkDB
All DBs
Position
IV:complement(501753..503273)
Genome browser
AA seq
506 aa
AA seq
DB search
MDPFLEFRVGNISLNEFYRRTIQSEFERILEDPLSNMKNYRFSKQSNYSTKEKTPLSIGV
NCLDIDDTGQVLLGGGDDGSLSIWGLDESLHRNDEGEQELINKRLNYIKRQPHQSDDEPA
QIMGYKNKRTRINDNNTMRLVHSFQTQRNKYRMYRQSSAAVPVQRSHISNKTDSPIGFSE
TLSETDSEASISHHKYGITTLKWYKADNGMFFTGSNDKTVKIWDTNRFEAVQDINLGYKI
NQIDNNVVDDSSLLVVASEDYYPRLIDLRTMNSGVTALGMGNQTRMQSEILCCKFNPVRE
QIIACGDMEGGVKLWDLRMRNRLYSELKRNKNRFKTINNDDNDDQSDVYFSSNQSKAHLR
CCSDIVWNSEGSELCSVGMDGKLNVWRPFTEILQPEGLASYSQLGTQDLSRIKYKKRVSR
RLLWFDKFLLCITDNGEVEIYNTEEKKLWNKLEYPMVNQVKKNQASHCQFSSMIVQTNIM
NSVGLKLFFGTNNNTVSDGGSIFECS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggatccatttttagagttcagagtaggcaatatctcattaaatgaattttatagaaga
actattcaaagcgaatttgagaggatccttgaagatcccctatcaaatatgaaaaactac
agatttagtaaacaatcaaactatagtacaaaagaaaaaacaccgttaagtataggtgtt
aactgtcttgatattgatgatactggtcaagtgttattaggaggtggagatgatgggtca
ctttccatttggggtttagatgaatcattgcaccgcaatgatgaaggtgaacaggaattg
atcaataaaaggctaaactatatcaagcgacagcctcaccaatcagatgatgagcctgct
caaataatgggttataaaaataaaagaacacgaataaacgacaacaacactatgagactg
gtgcacagttttcaaacacagagaaacaaatatcgaatgtatagacagtctagtgctgca
gttccagttcaaagatcacacatatcaaataaaacggattctcctatcgggtttagtgag
acactatctgaaacagattcagaagcttccatatctcaccataaatatggtataacaact
ttgaagtggtataaggctgataatgggatgttttttactggctcaaatgataaaactgta
aaaatatgggacacaaacaggtttgaagcggttcaagatataaacctggggtataaaata
aatcaaattgataataacgttgtcgacgacagttctttgcttgtagtggcaagtgaagac
tactatccaagattaattgacctgagaaccatgaattcaggggtaactgcgcttggaatg
ggaaatcaaacacgaatgcaatcagaaattttatgctgcaaatttaaccccgtcagggaa
cagattattgcttgtggtgacatggagggtggggtaaaattatgggatctaagaatgagg
aacagactgtattcagaattgaaaagaaataaaaataggttcaagactataaataacgat
gataatgacgatcaaagcgatgtctatttcagctctaaccaatcaaaagcccatctgaga
tgttgcagtgacattgtttggaatagtgagggttcagagctatgttcagtcggcatggat
ggaaaactgaatgtttggaggccatttacggaaattctgcaaccagaaggtctagctagt
tattcccagttgggaacacaagacctgagccgtatcaaatacaaaaaaagagtatctcga
aggttgctttggtttgacaagtttttactgtgtattactgacaatggtgaagtagaaata
tacaatacggaggaaaaaaaactttggaacaagctcgaatacccaatggttaatcaggta
aaaaaaaatcaggcttcgcattgtcagtttagttccatgattgtgcaaacaaatataatg
aattcagttggcctcaaattgttctttggaactaacaacaacaccgttagcgacggcgga
tccatctttgaatgttcataa
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