Saccharomyces cerevisiae (budding yeast): YDR080W
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Entry
YDR080W CDS
T00005
Symbol
VPS41, CVT8, FET2, SVL2, VAM2, VPL20
Name
(RefSeq) Vps41p
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04138
Autophagy - yeast
sce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
YDR080W (VPS41)
04148 Efferocytosis
YDR080W (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YDR080W (VPS41)
Membrane trafficking [BR:
sce04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
YDR080W (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Vps41
TPR_Vps41
Clathrin
WD40
WD40_CDC20-Fz
Vps39_1
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
DUF4668
Beta-prop_IFT122_1st
DUF3246
Motif
Other DBs
NCBI-GeneID:
851653
NCBI-ProteinID:
NP_010365
SGD:
S000002487
UniProt:
P38959
Structure
PDB
PDBj
LinkDB
All DBs
Position
IV:604008..606986
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AA seq
992 aa
AA seq
DB search
MTTDNHQNDSVLDQQSGERTIDESNSISDENNVDNKREDVNVTSPTKSVSCISQAENGVA
SRTDESTITGSATDAETGDDDDDDDDDDDEDEDDEDEPPLLKYTRISQLPKNFFQRDSIS
SCLFGDTFFAFGTHSGILHLTTCAFEPIKTIKCHRSSILCINTDGKYFATGSIDGTVIIG
SMDDPQNITQYDFKRPINSVALHSNFQASRMFVSGGMAGDVVLSQRNWLGNRIDIVLNKK
KKKKTRKDDLSSDMKGPIMGIYTMGDLILWMDDDGITFCDVPTRSQLLNIPFPSRIFNVQ
DVRPDLFRPHVHFLESDRVVIGWGSNIWLFKVSFTKDSNSIKSGDSNSQSNNMSHFNPTT
NIGSLLSSAASSFRGTPDKKVELECHFTVSMLITGLASFKDDQLLCLGFDIDIEEEATID
EDMKEGKNFSKRPENLLAKGNAPELKIVDLFNGDEIYNDEVIMKNYEKLSINDYHLGKHI
DKTTPEYYLISSNDAIRVQELSLKDHFDWFMERKQYYKAWKIGKYVIGSEERFSIGLKFL
NSLVTKKDWGTLVDHLNIIFEETLNSLDSNSYDVTQNVLKEWADIIEILITSGNIVEIAP
LIPKKPALRKSVYDDVLHYFLANDMINKFHEYITKWDLKLFSVEDFEEELETRIEAASEP
TASSKEEGSNITYRTELVHLYLKENKYTKAIPHLLKAKDLRALTIIKIQNLLPQYLDQIV
DIILLPYKGEISHISKLSIFEIQTIFNKPIDLLFENRHTISVARIYEIFEHDCPKSFKKI
LFCYLIKFLDTDDSFMISPYENQLIELYSEYDRQSLLPFLQKHNNYNVESAIEVCSSKLG
LYNELIYLWGKIGETKKALSLIIDELKNPQLAIDFVKNWGDSELWEFMINYSLDKPNFTK
AILTCSDETSEIYLKVIRGMSDDLQIDNLQDIIKHIVQENSLSLEVRDNILVIINDETKK
FANEFLKIRSQGKLFQVDESDIEINDDLNGVL
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgactacagataatcatcagaatgattctgttttggatcaacaatcaggcgaacgaaca
attgatgagagtaattccatctctgacgagaataatgttgataataagagggaagacgtt
aatgtaacttcaccaacaaaaagtgttagttgcatatcacaagcggaaaatggagtagct
tctcgaacagatgagagtacaataacaggaagtgcgacggatgcagaaacaggtgatgat
gatgatgatgatgatgatgacgatgatgaagatgaggatgacgaagatgagcccccctta
ttgaagtacacacgaattagtcaactcccgaagaacttttttcaacgagactcgatctct
tcatgtttatttggtgatactttttttgcatttggtacacactcaggcattctacactta
actacatgcgcgttcgaacccattaaaaccatcaaatgccatagatcttcgatactttgt
attaacactgacggaaaatattttgctacgggatctattgacgggacagtgattatcgga
tcgatggatgatccacaaaacattacacaatacgatttcaaaagacctataaactctgta
gcgttgcactcaaattttcaagcatccagaatgtttgtttctggtggaatggctggcgac
gttgtactatctcagagaaattggctaggaaatagaatcgacatcgttttaaacaagaag
aaaaagaaaaaaacaagaaaagatgacctatcctctgatatgaagggccctatcatggga
atttatactatgggtgaccttatattatggatggatgatgatggaataacattttgcgat
gttcctacaagatcacagcttttgaatattccattcccctccagaatttttaacgtacag
gatgtaaggccagatctatttagaccccatgttcattttttagaaagtgatcgtgtcgtt
atcggatggggatctaatatttggctatttaaagtttcctttaccaaggattcaaattcg
atcaaatccggtgactctaattctcaaagtaataatatgagtcattttaaccctacgaca
aacatcggatctctcttgtctagtgctgcatcgagttttagagggacacctgataagaaa
gttgaattagaatgccattttactgtgtcaatgttgattacagggcttgcatcgtttaag
gatgatcagttattatgcctaggttttgatatagatattgaagaggaagcaaccatagat
gaagatatgaaggaggggaagaattttagcaagcggccagaaaacttattagccaaaggg
aatgctccagaattaaaaattgttgatctttttaatggtgatgaaatctataatgatgaa
gttatcatgaaaaactatgaaaaattgtctataaatgattatcacctcggtaaacatata
gataaaacaacaccagaatactatttgataagttccaacgatgccatcagggttcaagag
ttatcattgaaggatcatttcgattggtttatggaaagaaagcaatattataaagcttgg
aaaatcggtaaatatgtaattggatcagaagagaggtttagtatagggttgaaattcctc
aactctttagtaactaaaaaagattggggtacattagtggaccacttaaatattattttc
gaagaaactttaaactcattggattccaactcatatgatgtcactcaaaacgtgctgaaa
gaatgggcagatataatagagattttgattacatcaggaaatattgtagaaattgcgcct
ttgattcccaagaaacctgccttaagaaagtcggtatatgacgatgtattacattacttt
ttggccaatgacatgatcaataagtttcatgagtatattactaagtgggatttaaagctt
ttttctgtggaagatttcgaagaagagctagaaacaagaatagaggctgctagtgaacct
acagcttcatcgaaggaagaagggtctaatattacctatagaactgagttggtgcattta
tatttgaaagagaataaatataccaaggctataccgcaccttttgaaagctaaggactta
agagctttaactattataaaaatacaaaatttattgccgcagtatctagaccagatagtt
gatatcattcttttaccatataagggtgaaatttcccatatttccaaactatcaatattt
gaaattcaaacaatttttaacaaaccaatagacctgttgtttgaaaatagacacaccata
tcagtcgctagaatatacgaaatatttgaacatgattgtccaaaaagtttcaaaaagatt
ttattttgttatttaataaaatttttagatacggacgactcgttcatgataagtccttat
gaaaatcaactaattgaactttattctgaatacgaccgacaaagccttctgccttttctg
caaaagcacaataactataatgtagagagtgccatcgaagtctgttcatcgaaacttggt
ttatataatgaactgatctatttgtgggggaaaatcggtgaaacgaagaaagcattgtct
ttgattattgacgagttaaaaaacccgcaattagctatagattttgttaaaaactggggt
gattcagaactttgggaattcatgattaactatagtcttgacaaacctaattttactaaa
gccattttaacatgttctgatgagaccagcgaaatttacctaaaagtgatcagaggtatg
tccgatgatctgcaaattgacaacctgcaggatattattaaacatatcgttcaagaaaat
tcattaagcttggaagttagagataatattttggttatcattaatgatgaaacgaaaaaa
tttgccaatgaattcctgaaaataagaagtcaaggtaaattgtttcaagtagacgaaagc
gatattgaaattaatgacgacttaaatggtgttttataa
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