Saccharomyces cerevisiae (budding yeast): YDR097C
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Entry
YDR097C CDS
T00005
Symbol
MSH6, PMS3, PMS6
Name
(RefSeq) mismatch repair ATPase MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YDR097C (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sce03400
]
YDR097C (MSH6)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
YDR097C (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_27
Zeta_toxin
AAA_23
Motif
Other DBs
NCBI-GeneID:
851671
NCBI-ProteinID:
NP_010382
SGD:
S000002504
UniProt:
Q03834
LinkDB
All DBs
Position
IV:complement(640109..643837)
Genome browser
AA seq
1242 aa
AA seq
DB search
MAPATPKTSKTAHFENGSTSSQKKMKQSSLLSFFSKQVPSGTPSKKVQKPTPATLENTAT
DKITKNPQGGKTGKLFVDVDEDNDLTIAEETVSTVRSDIMHSQEPQSDTMLNSNTTEPKS
TTTDEDLSSSQSRRNHKRRVNYAESDDDDSDTTFTAKRKKGKVVDSESDEDEYLPDKNDG
DEDDDIADDKEDIKGELAEDSGDDDDLISLAETTSKKKFSYNTSHSSSPFTRNISRDNSK
KKSRPNQAPSRSYNPSHSQPSATSKSSKFNKQNEERYQWLVDERDAQRRPKSDPEYDPRT
LYIPSSAWNKFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGG
RANMQLAGIPEMSFEYWAAQFIQMGYKVAKVDQRESMLAKEMREGSKGIVKRELQCILTS
GTLTDGDMLHSDLATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQ
MLEFEDDSECTKLDTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFY
DCDKTYAEIISSEYFSTEEDWPEVLKSYYDTGKKVGFSAFGGLLYYLKWLKLDKNLISMK
NIKEYDFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKKWLM
HPLLRKNDIESRLDSVDSLLQDITLREQLEITFSKLPDLERMLARIHSRTIKVKDFEKVI
TAFETIIELQDSLKNNDLKGDVSKYISSFPEGLVEAVKSWTNAFERQKAINENIIVPQRG
FDIEFDKSMDRIQELEDELMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSN
WVQMAANKTYKRYYSDEVRALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQ
AISNIDCLLAITRTSEYLGAPSCRPTIVDEVDSKTNTQLNGFLKFKSLRHPCFNLGATTA
KDFIPNDIELGKEQPRLGLLTGANAAGKSTILRMACIAVIMAQMGCYVPCESAVLTPIDR
IMTRLGANDNIMQGKSTFFVELAETKKILDMATNRSLLVVDELGRGGSSSDGFAIAESVL
HHVATHIQSLGFFATHYGTLASSFKHHPQVRPLKMSILVDEATRNVTFLYKMLEGQSEGS
FGMHVASMCGISKEIIDNAQIAADNLEHTSRLVKERDLAANNLNGEVVSVPGGLQSDFVR
IAYGDGLKNTKLGSGEGVLNYDWNIKRNVLKSLFSIIDDLQS
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggccccagctacccctaaaacttctaagactgcacacttcgaaaatggctccacatct
tctcaaaagaaaatgaagcaatcgagtttgttatcttttttctcaaaacaggtaccttct
ggcacaccgtcaaagaaggtccagaagcctactccagcgactttagaaaatacagctact
gataagataacaaagaatccacaaggaggaaagacaggcaaacttttcgtagatgtagac
gaagacaatgatttgacaatagctgaagaaacggtatcaactgtaaggagtgacataatg
cattctcaagagccccaatctgatactatgttaaatagtaacacgacagaacctaaaagt
accactacggacgaggatttatcatcttcccaatctcgaaggaatcacaaaaggagagtg
aattatgccgaaagtgatgatgatgactcagatactacattcactgctaaacggaagaag
ggtaaggtagttgatagtgaaagcgatgaggatgaatatttaccagataaaaatgacggc
gatgaagatgacgatattgcagacgacaaagaggacatcaaaggagaattggcagaagat
agtggtgatgacgatgatttaatctctctggcagaaacgacttctaagaaaaaattttca
tacaacacttcgcattcttcatcgccctttacaagaaatatatcccgtgacaactcaaaa
aagaaaagcaggccaaatcaggcaccaagtagatcgtacaatccttctcatagtcaacca
tcagcgacttctaagtctagcaaattcaataaacaaaatgaagaacgatatcaatggtta
gtggatgaacgagatgctcagcgccgtcccaagagtgatccagagtacgatccaagaaca
ctgtacatcccatcttctgcatggaacaagtttactccgtttgaaaaacaatattgggaa
attaaatccaaaatgtgggattgtattgtctttttcaaaaagggtaagttctttgaatta
tatgaaaaggatgcattattggctaatgcattatttgacttaaagattgcaggtggagga
cgcgctaatatgcaactagctgggattccagagatgtcatttgaatattgggccgctcag
tttatccaaatgggatataaagttgcgaaagtggatcaaagagagtcaatgttggctaaa
gaaatgagggaaggttctaaaggtatcgttaaaagagaactccagtgcatattgacatcg
ggtacgttaactgatggagatatgttgcattcggatctggctactttttgtcttgccatc
agggaagaacctggtaacttctacaatgaaactcagctagattcatcaacgatagtgcaa
aagctgaatacaaaaatattcggtgcagcattcattgatactgcaactggtgagcttcaa
atgctggagtttgaagatgatagtgaatgcaccaaattggacacattaatgtcgcaagta
agacctatggaagtcgtcatggagaggaataacttaagcacactagctaacaaaattgta
aaattcaattcagcacccaatgcaatttttaatgaggttaaagccggtgaagaattttat
gactgcgataaaacctatgctgaaatcatatcatcagaatacttttctacggaagaagat
tggccagaggttttgaaatcctattatgatacgggtaaaaaagttggctttagtgcattt
ggtggattattgtattatttgaagtggttaaaactggataagaatttaatttcgatgaaa
aatatcaaagagtacgattttgtaaaatcgcaacactccatggttttagatggtatcact
ttacagaacttggaaatattttccaattcgtttgatggttctgataagggtactttgttc
aaattattcaacagggctattactccaatgggtaagagaatgatgaaaaagtggttaatg
catccattattacgtaagaatgatattgaaagcaggctcgatagtgttgactctttgtta
caagatattacattaagagaacagctagagataacattttcaaaattgccagatttggaa
agaatgttggcccgtatccatagtaggacaattaaagtgaaagattttgaaaaggtaatt
accgcttttgaaacgattattgaattacaagactctttaaagaacaacgatttgaaggga
gatgtttcaaaatacatatcctctttccctgagggacttgtggaagctgtcaaaagctgg
actaatgcttttgaaagacaaaaagcaatcaatgaaaatatcattgtaccacaaagggga
tttgacatagagtttgataagtcaatggatagaatacaggagctagaagacgaattgatg
gaaattctgatgacttataggaagcaattcaaatgttccaatatacaatataaagattcc
ggaaaggagatatacactattgaaattcctatctctgcaactaaaaatgtcccatcaaat
tgggttcaaatggctgcgaacaaaacgtacaagagatactactctgatgaagtaagagct
ttagcaagatcgatggcggaggctaaagaaatacacaagacgttagaggaggacctaaaa
aatagattatgtcaaaaatttgatgcgcattataatacaatttggatgccaaccatacag
gccatctctaacatagattgtttgttggcaattacaaggacatctgaatatctaggtgct
ccctcttgtaggccaaccattgtagatgaggtggactcgaaaacgaatactcaattaaat
ggttttctgaaatttaaatcattaagacatccatgctttaacctcggcgctactacagca
aaggacttcattcctaacgacattgaattaggtaaagaacagcccagattaggattgtta
acgggtgccaacgcagctggtaaatccacgatattgaggatggcatgtattgccgtaatt
atggcacaaatgggatgttatgttccttgtgaatctgccgttctgacgccgattgataga
atcatgactcgtttaggcgctaatgataatatcatgcaaggtaaatctactttttttgtg
gaattggcggaaacaaaaaaaatattagacatggctaccaataggtcattattagttgtt
gacgagttgggaagaggaggttcatcgagtgatggttttgcaattgcagaaagtgtgcta
catcatgtcgcgacacatattcaaagtctgggtttttttgccacacattatgggacattg
gcatcaagtttcaagcaccatcctcaagtaagaccactgaaaatgagcattctagtcgat
gaagcgactaggaacgttacatttttgtataagatgcttgaaggacaaagtgaaggctct
tttggtatgcatgttgcgtcaatgtgtggcatttcaaaggaaattattgataacgcgcag
attgccgctgataatttagaacatacttctaggctagtcaaagaacgtgatttagctgca
aataatttgaatggtgaagttgtctctgtgccaggtggcttacaaagtgatttcgttcga
attgcgtacggagatggactgaagaatacaaaattaggttctggtgaaggggtcttgaac
tatgattggaacataaaaaggaacgttttgaaaagtctatttagtataattgatgattta
caatcctaa
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