Saccharomyces cerevisiae (budding yeast): YDR235W
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Entry
YDR235W CDS
T00005
Symbol
PRP42, MUD16, SNU65
Name
(RefSeq) mRNA splicing protein PRP42
KO
K13217
pre-mRNA-processing factor 39
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YDR235W (PRP42)
Spliceosome [BR:
sce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
YDR235W (PRP42)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
851821
NCBI-ProteinID:
NP_010521
SGD:
S000002643
UniProt:
Q03776
Structure
PDB
PDBj
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All DBs
Position
IV:933504..935138
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AA seq
544 aa
AA seq
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MDKYTALIHDENFSTLTLNVSRYPKSLAYWEKLLNYIVKASAPICKSTEPQLLKLIRCTY
SSMLNEFPYLENYYIDFALLEYKLGNVSMSHKIFQRGLQAFNQRSLLLWTSYLKFCNNVI
SHQKQLFKKYETAEEYVGLHFFSGEFWDLYLEQISSRCTSSKKYWNVLRKILEIPLHSFS
KFYALWLQRIDDIMDLKQLSQLTSKDELLKKLKIDINYSGRKGPYLQDAKKKLKKITKEM
YMVVQYQVLEIYSIFESKIYINYYTSPETLVSSDEIETWIKYLDYTITLQTDSLTHLNFQ
RALLPLAHYDLVWIKYSKWLINSKNDLLGAKNVLLMGLKFSLKKTEIIKLLYSVICKLNE
YVLLRNLLEKIESSYSDNVENVDDFEIFWDYLQFKTFCQNSLYSSRYSDSQSNGLLNKEL
FDKVWKRLSCKEKKSGQEILLNNLVQFYSKDTVEFVEKNIFQKIIEFGWEYYLQNGMFWN
CYCRLIYFDTSRSYLDKRQYIVRKIWPQIDKKFAQSVLPSLTEFCESYFPEEMDTLEEMF
TEEP
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggataaatatactgctttgattcacgatgagaatttttcaactcttacattgaatgtc
tcgagataccctaaaagtttggcatattgggagaagttactgaactatatagtaaaggct
tcggcaccaatatgcaagtccactgagcctcaattattaaagttaatacgatgtacttat
tcttctatgctgaatgagtttccctatctagaaaactactatatcgacttcgcgctactg
gaatacaaactagggaatgtttctatgtctcataagatatttcagcgcggattgcaagcc
tttaaccaaagatctttactattatggacttcatatttaaagttttgtaataacgttatc
tcacaccagaagcagttgtttaaaaaatatgaaacagctgaagaatatgttggtttgcat
tttttcagtggggaattctgggatttatacctggaacaaattagctcaagatgtacgtct
tctaagaaatattggaacgttttgaggaagatactcgaaattcctttacactctttttcg
aaattttatgcattatggttacagcgcatagacgatataatggacctaaagcaattatca
caactaacaagtaaagatgaattattgaagaaactcaagatagacatcaattacagtgga
agaaagggaccgtacctgcaggatgcaaagaaaaagttgaagaaaataacgaaggaaatg
tacatggttgtacaatatcaagtacttgaaatctattccatttttgaatcaaaaatttat
atcaactattatacatcgccagaaaccttggtttcttcagatgaaatagaaacatggata
aaatacttggattataccatcaccttacaaacagattctttaacacatttaaattttcaa
agagctttacttcctctggcccattatgatcttgtatggataaaatacagtaaatggttg
ataaattcaaaaaatgaccttttgggggcaaaaaacgttctattaatgggtcttaaattt
tctttgaagaagaccgaaataataaaactactgtattcagttatttgcaagttaaatgag
tacgtacttttgcgaaatctattggaaaaaattgagtcctcatattccgacaatgttgaa
aacgttgatgattttgagatattttgggactatcttcagttcaaaacgttctgccagaat
tctctgtattccagtcgatattctgattcacaatcaaacgggcttttgaataaggagctg
tttgataaagtatggaaacgtttgagttgtaaagaaaaaaaaagtggtcaagaaatttta
ttgaataacttagtacagttttattcgaaggataccgtagaatttgtagaaaagaacata
tttcaaaagataatagaatttggttgggagtactacctacagaacggtatgttctggaac
tgttattgccgtttaatttatttcgacacttctaggtcatatttggacaagaggcaatat
attgtcagaaaaatatggccccaaatagacaaaaaatttgcacagagcgtcttgccgtct
ttaacagaattctgtgagtcatacttcccagaggagatggatacattagaggaaatgttt
actgaagaaccttag
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