Saccharomyces cerevisiae (budding yeast): YDR311W
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Entry
YDR311W CDS
T00005
Symbol
TFB1
Name
(RefSeq) TFIIH/NER complex subunit TFB1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03022
Basal transcription factors
sce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
YDR311W (TFB1)
09124 Replication and repair
03420 Nucleotide excision repair
YDR311W (TFB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YDR311W (TFB1)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YDR311W (TFB1)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
YDR311W (TFB1)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
YDR311W (TFB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
851906
NCBI-ProteinID:
NP_010597
SGD:
S000002719
UniProt:
P32776
A0ABF7PJ00
Structure
PDB
PDBj
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All DBs
Position
IV:1085065..1086993
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AA seq
642 aa
AA seq
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MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMML
RLIGKVDESKKRKDNEGNEVVPKPQRHMFSFNNRTVMDNIKMTLQQIISRYKDADIYEEK
RRREESAQHTETPMSSSSVTAGTPTPHLDTPQLNNGAPLINTAKLDDSLSKEKLLTNLKL
QQSLLKGNKVLMKVFQETVINAGLPPSEFWSTRIPLLRAFALSTSQKVGPYNVLSTIKPV
ASSENKVNVNLSREKILNIFENYPIVKKAYTDNVPKNFKEPEFWARFFSSKLFRKLRGEK
IMQNDRGDVIIDRYLTLDQEFDRKDDDMLLHPVKKIIDLDGNIQDDPVVRGNRPDFTMQP
GVDINGNSDGTVDILKGMNRLSEKMIMALKNEYSRTNLQNKSNITNDEEDEDNDERNELK
IDDLNESYKTNYAIIHLKRNAHEKTTDNDAKSSADSIKNADLKVSNQQMLQQLSLVMDNL
INKLDLNQVVPNNEVSNKINKRVITAIKINAKQAKHNNVNSALGSFVDNTSQANELEVKS
TLPIDLLESCRMLHTTCCEFLKHFYIHFQSGEQKQASTVKKLYNHLKDCIEKLNELFQDV
LNGDGESMSNTCTAYLKPVLNSITLATHKYDEYFNEYNNNSN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattccggagctgccatttttgagaaagtttctgggataattgccataaatgag
gatgtttcacccgcagaattgacatggaggtctacggacggtgacaaggttcacacagtt
gtcttatccactattgacaagttacaagctacccctgcttccagtgaaaaaatgatgttg
aggctaatcgggaaagtggatgagtcaaaaaagagaaaagacaacgaaggaaatgaggtt
gtgcccaaaccgcaacgtcatatgttttcgtttaacaatagaacagttatggataatatc
aagatgacccttcaacaaatcatctcacggtataaagatgcagatatctacgaagaaaag
agaagaagagaggagtctgcgcaacacacagaaacaccaatgagctcttcttctgttact
gcagggactcccacaccacatctcgatacaccacaattgaataatggggctccgttgatt
aatacagccaaactagatgattctctctctaaagaaaaattgttgaccaatttaaagcta
cagcaatctttactgaaaggaaacaaagttctaatgaaggtttttcaggaaacagtcatt
aacgccggtttgcctccatctgaattttggtcaactagaattccgttattgagggctttt
gccttatctacttctcaaaaagttgggccttacaacgttttgtcaactatcaagccggtg
gcttcatcggaaaacaaagtcaatgttaatttgtcaagagaaaaaattttgaatattttt
gagaactatccaattgtaaagaaagcttacactgataatgtgcccaaaaatttcaaagaa
ccagagttctgggcaaggttcttctcttcgaagttattcagaaaattaaggggtgaaaag
atcatgcaaaatgatagaggtgacgtaatcattgacaggtacttgacattggatcaagag
ttcgacagaaaagatgatgacatgctattgcatcctgtgaaaaaaattatagatttagat
ggtaacatacaggacgacccagttgtacgaggcaacaggcccgacttcactatgcagcca
ggtgtggatattaatggtaatagcgatggtaccgtggacatcttaaagggtatgaataga
ttgagtgaaaaaatgattatggctttgaagaatgagtattcaaggacaaatctacagaac
aaatctaatattacaaacgatgaggaagatgaagataatgatgaaagaaatgaactgaaa
atcgatgacttaaacgaaagctacaagacaaactatgcaatcatacatctgaaaaggaac
gcacatgaaaagacaaccgacaacgatgcgaaaagctcggcagactcgataaagaatgca
gatttgaaggtttctaatcaacaaatgttacaacagttgtcattggtcatggataattta
attaataagctagacttgaaccaagtagttcctaacaacgaagtcagcaacaagatcaat
aaaagagtcataactgcaatcaagattaacgccaaacaggctaagcataacaatgttaat
tcagcactcggctcttttgtcgacaacacttctcaagcaaatgaattagaggtgaaaagt
accctaccaatagacctattagaaagttgtagaatgctacacacaacgtgctgtgaattt
ctaaagcacttttatattcattttcagagcggtgaacaaaagcaagccagtaccgtcaaa
aaactttataatcatttgaaggactgtattgaaaagctgaatgagctatttcaagacgtc
cttaatggtgatggtgaatctatgtcaaacacatgtaccgcctatttgaagccagttttg
aactccattactttggctactcataagtacgatgagtacttcaacgaatataacaacaat
tcgaactag
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