Saccharomyces cerevisiae (budding yeast): YDR460W
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Entry
YDR460W CDS
T00005
Symbol
TFB3, RIG2
Name
(RefSeq) TFIIH/NER complex subunit TFB3
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03022
Basal transcription factors
sce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
YDR460W (TFB3)
09124 Replication and repair
03420 Nucleotide excision repair
YDR460W (TFB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YDR460W (TFB3)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YDR460W (TFB3)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
YDR460W (TFB3)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
YDR460W (TFB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Perilipin
zf-RING_5
TRAF3_RING
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
FliS
Motif
Other DBs
NCBI-GeneID:
852071
NCBI-ProteinID:
NP_010748
SGD:
S000002868
UniProt:
Q03290
A0ABF7PJ07
Structure
PDB
PDBj
LinkDB
All DBs
Position
IV:1383811..1384776
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AA seq
321 aa
AA seq
DB search
MLMDEYEENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCD
KILRKNKFKTQIFDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKL
DHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIE
EEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYF
NSNVNVQNSRLKDAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFIASGFNTNY
AYERVLTEAFMGLGCVISEEL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggatgagtatgaggaaaacaaggacatgtgtccgatctgtaagacagatcga
tacctttctccggatgtgaaatttttggtgaatcctgaatgctatcacaggatctgtgag
tcgtgtgttgatcgaatatttagtctcggtcctgcccagtgtccatataaagggtgtgac
aagattcttagaaagaataagttcaagacccaaatattcgatgatgtggaagttgagaaa
gaagttgacatcaggaagagagtgttcaatgtgttcaacaaaactatcgatgacttcaat
ggtgaccttgtggaatataacaaatatttggaagaggtggaagacattatatacaaacta
gatcacgggatcgatgtggctaagaccgaggagaaactacgcacctacgaggaattaaac
aagcaactgattatgaataacttggagagaagcagaacagagatagaaagtttcgaacag
agacaaaaattcgaaaaggagatgaaattgaagaagcgactgttggaaagacaaatcgaa
gaggaggaaagaatgaacaaagagtggacaaagaaagaaatcgtcaaccggttgagtacg
accacccaggatatcaatgaaacaatcgaaggcgttaaaaatacggttaaattgaaaaaa
tcgtccgctagaaggaaattggaagaactaaatagagttctgaaaaacaatccatatttc
aattcaaatgtgaacgtacagaattcgagactcaaagatgctgtaccgttcacgccgttt
aacggtgatagagaagcacacccaaggtttacgttgaaaggttcagtatacaatgaccca
ttcatcaaagatcttgagcacaggaaagaatttattgcgtctgggttcaacactaattat
gcgtacgaaagggtgttgacagaggcatttatgggcttaggatgtgttatatccgaggag
ctttaa
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