Saccharomyces cerevisiae (budding yeast): YER139C
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Entry
YER139C CDS
T00005
Symbol
RTR1
Name
(RefSeq) RNA polymerase II subunit B1 CTD phosphatase RTR1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sce01009
]
YER139C (RTR1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YER139C (RTR1)
Enzymes [BR:
sce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
YER139C (RTR1)
Protein phosphatases and associated proteins [BR:
sce01009
]
HAD phosphatases
Fcp/Scp phosphatases
YER139C (RTR1)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
YER139C (RTR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
856882
NCBI-ProteinID:
NP_011066
SGD:
S000000941
UniProt:
P40084
Structure
PDB
PDBj
LinkDB
All DBs
Position
V:complement(450563..451243)
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AA seq
226 aa
AA seq
DB search
MATIEDIKETALIPFQKHRQLSMHEAEVITLEIIGLLCDSECKDEKTLKYLGRFLTPDMY
QDLVDERNLNKRCGYPLCGKSPERIRDPFSMNDTTKKFLLENNPYAYLSHYCSKFHFRCS
QFYQVQLSDEALFARTGVHLFEDPEQDKHDIDFKVTLFEELLREKASEEDIKSLISGLKK
LGLNPDSGTTEKDDTELEDDLSKWLAQIKIVENDNPSILGDFTRED
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgattgaagatattaaggaaacggcgttaatccctttccaaaagcacaggcaa
ctttccatgcatgaagcagaagttataactttagagattataggcttattatgtgattca
gaatgcaaggatgagaaaacattgaaatatttgggccgatttctcacaccggatatgtat
caagacctagtagatgagaggaatctaaacaaaagatgcggatatcctctttgcggtaaa
tcgccagaaagaatacgtgatccattttcaatgaatgatactactaagaaatttttatta
gaaaacaatccgtatgcatatttgtcgcactattgcagtaagttccattttagatgttcc
caattttatcaagtgcaactatctgatgaagctttatttgcaagaacaggggttcaccta
tttgaagatcctgaacaggacaaacacgatatagatttcaaagtgactttgtttgaagag
ttgctaagagaaaaggcatccgaagaagacattaaatcattgatatccggtctcaaaaag
ttaggattaaatcctgacagtgggactacagaaaaagatgatactgagctggaagatgat
ttatcgaagtggttggcacaaatcaaaattgttgagaatgataatcccagcattttgggt
gatttcacaagggaagattga
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