Saccharomyces cerevisiae (budding yeast): YGL120C
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Entry
YGL120C CDS
T00005
Symbol
PRP43
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YGL120C (PRP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YGL120C (PRP43)
03009 Ribosome biogenesis [BR:
sce03009
]
YGL120C (PRP43)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
YGL120C (PRP43)
Spliceosome [BR:
sce03041
]
Complex A
U2 snRNP components
U2 related factors
YGL120C (PRP43)
Complex B
YGL120C (PRP43)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
YGL120C (PRP43)
Ribosome biogenesis [BR:
sce03009
]
Eukaryotic type
90S particles
Helicases
YGL120C (PRP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
ResIII
AAA_23
AAA_7
T2SSE
AAA_30
ABC_tran
Motif
Other DBs
NCBI-GeneID:
852757
NCBI-ProteinID:
NP_011395
SGD:
S000003088
UniProt:
P53131
Structure
PDB
LinkDB
All DBs
Position
VII:complement(281634..283937)
Genome browser
AA seq
767 aa
AA seq
DB search
MGSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSA
EEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS
GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN
KTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPD
LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHAT
EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPA
PESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS
AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF
DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ
EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIH
KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV
AKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIE
IAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGKNKKKSKHSKK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaaagaagattctcgtccgaacacccggatccagttgagacctctattcct
gagcaggccgccgagattgcggaagaattatccaaacagcatcctcttccatccgaagag
ccacttgtccatcatgatgctggtgaattcaagggcttgcaacgtcaccatacttcagca
gaagaggcccaaaaacttgaagatggaaaaataaatccatttaccggtagggagtttaca
ccaaaatatgttgatatcctgaaaattagaagagaattgccagtacatgcccagagagat
gagtttttaaaactttatcaaaataaccagattatggtttttgttggtgaaacaggttcc
ggtaaaacgacacaaattcctcaattcgttttattcgatgagatgccacacttagagaac
actcaagttgcatgtactcaacctcgtcgtgtcgcagcaatgtctgttgcacagagagtt
gctgaggaaatggatgtcaagttgggcgaagaagttggttattctatcagattcgaaaat
aaaacttctaataaaacgatattgaagtatatgactgatggtatgttgttgagagaggca
atggaagaccatgacttgtcgcgttattcatgtatcattctggatgaagcgcacgaacgt
acactagctactgatattttgatgggtcttttgaagcaagtagtcaagaggagacctgat
ttgaagataattattatgtctgctactctggatgcagagaagttccaacgctacttcaac
gatgctccattacttgccgttccgggcagaacatatccagttgagctatactatacaccg
gaatttcaaagggactatttagattctgccattcgtactgttttgcaaattcatgccact
gaagaggctggcgatattttgttatttttaactggtgaagatgaaattgaagacgctgtc
agaaagatttccttagaaggtgatcaattggttagagaagagggatgcggacctttatcc
gtatacccactgtatggttcattaccaccgcatcaacaacaaagaatattcgagcctgct
ccagagtcacataatggtagaccaggcaggaaagttgttatctccacgaacatcgctgaa
acttctttaacaattgatggtattgtctacgtcgttgacccaggattttcaaagcaaaaa
gtttacaatccaagaattagagttgagtctttacttgtttcccctatctccaaggcttct
gcccaacaaagagctggtcgtgctggtcgtacaaggcctggtaaatgtttcagattatac
actgaagaggcattccaaaaggaactgatagagcaaagttacccagaaattttacgttcc
aatttatcctccaccgttctagaactaaaaaaattaggtattgatgacttggtccatttc
gattttatggatccaccggctccggaaacaatgatgagagcccttgaagaactaaattat
ttggcatgtctggacgacgaaggtaacttaacacccctaggtagattggcatcccagttt
cccttggatcctatgctagcggtgatgttaattgggtcctttgagttccaatgttctcaa
gaaatactaactatagtggccatgctatcggttccaaacgtgtttattcgcccaacaaag
gacaagaagcgagcagatgatgccaagaatatctttgctcatccagacggtgatcatatc
accttactaaatgtatatcatgcgttcaaatcggatgaagcttatgaatatggtatccat
aagtggtgccgtgaccactatctaaattacaggtccctttccgctgctgataatatccgc
tcccaattagaaagattaatgaaccgttacaacctagaattaaacactacagactatgaa
agccctaaatactttgacaacatcagaaaggctcttgcgtctgggtttttcatgcaagta
gcaaaaaaaagatcgggagctaaaggatacatcacagttaaagataaccaagatgttctg
atccatcctagtacggttcttggccacgacgcagaatgggtcatttacaatgaatttgtg
ctcacatcgaagaactacataagaactgtgacctcggtcaggcccgaatggctgattgaa
atagcgcctgcatactacgacttaagcaatttccaaaaaggtgatgtcaaattatctttg
gaaaggatcaaggaaaaagttgatagattaaacgagttgaaacaaggtaaaaacaaaaag
aagagtaagcactccaagaaatag
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