KEGG   Saccharomyces cerevisiae (budding yeast): YGR075C
Entry
YGR075C           CDS       T00005                                 
Symbol
PRP38
Name
(RefSeq) U4/U6-U5 snRNP complex subunit PRP38
  KO
K12851  pre-mRNA-splicing factor 38
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    YGR075C (PRP38)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sce03041]
    YGR075C (PRP38)
Spliceosome [BR:sce03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    YGR075C (PRP38)
SSDB
Motif
Pfam: PRP38 FAM163
Other DBs
NCBI-GeneID: 852966
NCBI-ProteinID: NP_011589
SGD: S000003307
UniProt: Q00723
Structure
LinkDB
Position
VII:complement(636147..636875)
AA seq 242 aa
MAVNEFQVESNISPKQLNNQSVSLVIPRLTRDKIHNSMYYKVNLSNESLRGNTMVELLKV
MIGAFGTIKGQNGHLHMMVLGGIEFKCILMKLIEIRPNFQQLNFLLNVKNENGFDSKYII
ALLLVYARLQYYYLNGNNKNDDDENDLIKLFKVQLYKYSQHYFKLKSFPLQVDCFAHSYN
EELCIIHIDELVDWLATQDHIWGIPLGKCQWNKIYNSDEESSSSESESNGDSEDDNDTSS
ES
NT seq 729 nt   +upstreamnt  +downstreamnt
atggctgtcaatgaatttcaagtggagtctaacatctctccaaaacaactgaataaccag
tcagtgtcacttgttattcctcggttgacaagagataaaattcataattcaatgtactat
aaagtaaatctaagcaacgaatctttgagaggcaatacaatggtagagcttttgaaagtt
atgattggcgcatttggtaccataaaaggtcaaaatggtcatttacacatgatggttctc
ggtggcattgagtttaaatgcatcttaatgaagttaatcgaaatcagaccgaatttccag
cagttgaacttcttattgaatgtaaaaaatgagaacggttttgactcgaaatatattatt
gctttgcttctggtttatgcgcggttacagtattattatttgaatggcaataacaaaaac
gatgatgatgaaaatgatttgataaagttatttaaagtacaattatacaaatattcacag
cattatttcaaactaaaaagtttcccactacaagtagactgctttgctcactcctataac
gaagaactttgtataatacacattgatgaattagtcgattggttggccacacaggaccat
atctggggtattccattagggaaatgtcaatggaataaaatatacaactctgatgaagag
agtagttctagcgaaagcgaaagtaatggtgacagtgaagatgacaacgacaccagcagc
gaatcatag

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