Saccharomyces cerevisiae (budding yeast): YHR165C
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Entry
YHR165C CDS
T00005
Symbol
PRP8, DBF3, DNA39, RNA8, SLT21, USA2
Name
(RefSeq) U4/U6-U5 snRNP complex subunit PRP8
KO
K12856
pre-mRNA-processing factor 8
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YHR165C (PRP8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YHR165C (PRP8)
Spliceosome [BR:
sce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
YHR165C (PRP8)
Complex C
U5 SnRNP specific factors
YHR165C (PRP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
JAB
Motif
Other DBs
NCBI-GeneID:
856570
NCBI-ProteinID:
NP_012035
SGD:
S000001208
UniProt:
P33334
Structure
PDB
PDBj
LinkDB
All DBs
Position
VIII:complement(429707..436948)
Genome browser
AA seq
2413 aa
AA seq
DB search
MSGLPPPPPGFEEDSDLALPPPPPPPPGYEIEELDNPMVPSSVNEDTFLPPPPPPPSNFE
INAEEIVDFTLPPPPPPPGLDELETKAEKKVELHGKRKLDIGKDTFVTRKSRKRAKKMTK
KAKRSNLYTPKAEMPPEHLRKIINTHSDMASKMYNTDKKAFLGALKYLPHAILKLLENMP
HPWEQAKEVKVLYHTSGAITFVNETPRVIEPVYTAQWSATWIAMRREKRDRTHFKRMRFP
PFDDDEPPLSYEQHIENIEPLDPINLPLDSQDDEYVKDWLYDSRPLEEDSKKVNGTSYKK
WSFDLPEMSNLYRLSTPLRDEVTDKNYYYLFDKKSFFNGKALNNAIPGGPKFEPLYPREE
EEDYNEFNSIDRVIFRVPIRSEYKVAFPHLYNSRPRSVRIPWYNNPVSCIIQNDEEYDTP
ALFFDPSLNPIPHFIDNNSSLNVSNTKENGDFTLPEDFAPLLAEEEELILPNTKDAMSLY
HSPFPFNRTKGKMVRAQDVALAKKWFLQHPDEEYPVKVKVSYQKLLKNYVLNELHPTLPT
NHNKTKLLKSLKNTKYFQQTTIDWVEAGLQLCRQGHNMLNLLIHRKGLTYLHLDYNFNLK
PTKTLTTKERKKSRLGNSFHLMRELLKMMKLIVDTHVQFRLGNVDAFQLADGIHYILNHI
GQLTGIYRYKYKVMHQIRACKDLKHIIYYKFNKNLGKGPGCGFWQPAWRVWLNFLRGTIP
LLERYIGNLITRQFEGRSNEIVKTTTKQRLDAYYDLELRNSVMDDILEMMPESIRQKKAR
TILQHLSEAWRCWKANIPWDVPGMPAPIKKIIERYIKSKADAWVSAAHYNRERIKRGAHV
EKTMVKKNLGRLTRLWIKNEQERQRQIQKNGPEITPEEATTIFSVMVEWLESRSFSPIPF
PPLTYKNDTKILVLALEDLKDVYASKVRLNASEREELALIEEAYDNPHDTLNRIKKYLLT
QRVFKPVDITMMENYQNISPVYSVDPLEKITDAYLDQYLWYEADQRKLFPNWIKPSDSEI
PPLLVYKWTQGINNLSEIWDVSRGQSAVLLETTLGEMAEKIDFTLLNRLLRLIVDPNIAD
YITAKNNVVINFKDMSHVNKYGLIRGLKFASFIFQYYGLVIDLLLLGQERATDLAGPANN
PNEFMQFKSKEVEKAHPIRLYTRYLDRIYMLFHFEEDEGEELTDEYLAENPDPNFENSIG
YNNRKCWPKDSRMRLIRQDVNLGRAVFWEIQSRVPTSLTSIKWENAFVSVYSKNNPNLLF
SMCGFEVRILPRQRMEEVVSNDEGVWDLVDERTKQRTAKAYLKVSEEEIKKFDSRIRGIL
MASGSTTFTKVAAKWNTSLISLFTYFREAIVATEPLLDILVKGETRIQNRVKLGLNSKMP
TRFPPAVFYTPKELGGLGMISASHILIPASDLSWSKQTDTGITHFRAGMTHEDEKLIPTI
FRYITTWENEFLDSQRVWAEYATKRQEAIQQNRRLAFEELEGSWDRGIPRISTLFQRDRH
TLAYDRGHRIRREFKQYSLERNSPFWWTNSHHDGKLWNLNAYRTDVIQALGGIETILEHT
LFKGTGFNSWEGLFWEKASGFEDSMQFKKLTHAQRTGLSQIPNRRFTLWWSPTINRANVY
VGFLVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESIVFDICQILDGELDVLQIES
VTKETVHPRKSYKMNSSAADITMESVHEWEVSKPSLLHETNDSFKGLITNKMWFDVQLRY
GDYDSHDISRYVRAKFLDYTTDNVSMYPSPTGVMIGIDLAYNMYDAYGNWFNGLKPLIQN
SMRTIMKANPALYVLRERIRKGLQIYQSSVQEPFLNSSNYAELFNNDIKLFVDDTNVYRV
TVHKTFEGNVATKAINGCIFTLNPKTGHLFLKIIHTSVWAGQKRLSQLAKWKTAEEVSAL
VRSLPKEEQPKQIIVTRKAMLDPLEVHMLDFPNIAIRPTELRLPFSAAMSIDKLSDVVMK
ATEPQMVLFNIYDDWLDRISSYTAFSRLTLLLRALKTNEESAKMILLSDPTITIKSYHLW
PSFTDEQWITIESQMRDLILTEYGRKYNVNISALTQTEIKDIILGQNIKAPSVKRQKMAE
LEAARSEKQNDEEAAGASTVMKTKTINAQGEEIVVVASADYESQTFSSKNEWRKSAIANT
LLYLRLKNIYVSADDFVEEQNVYVLPKNLLKKFIEISDVKIQVAAFIYGMSAKDHPKVKE
IKTVVLVPQLGHVGSVQISNIPDIGDLPDTEGLELLGWIHTQTEELKFMAASEVATHSKL
FADKKRDCIDISIFSTPGSVSLSAYNLTDEGYQWGEENKDIMNVLSEGFEPTFSTHAQLL
LSDRITGNFIIPSGNVWNYTFMGTAFNQEGDYNFKYGIPLEFYNEMHRPVHFLQFSELAG
DEELEAEQIDVFS
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atgagtggactaccgcccccacctcctggttttgaagaggacagcgacttagcacttcca
ccaccaccaccaccaccgcctggatacgaaatcgaagaactggataatccgatggtgcca
tcatcggtaaatgaggatacattccttccgcctccaccacctcctccaagcaacttcgaa
ataaacgctgaagaaattgtggacttcacattaccaccgccaccaccccctccaggtcta
gatgaattagagactaaagcagaaaagaaagtagaattacatggaaagagaaaattggac
ataggaaaagatactttcgtcactcgaaaatcaagaaagcgtgcaaaaaaaatgaccaaa
aaggcaaagagaagcaatttatatactcctaaagccgagatgccaccggaacatctgcga
aagattattaatactcacagtgacatggcctccaaaatgtacaatactgataaaaaggct
tttctaggcgctctaaagtatttaccgcacgcgattttaaaattgttagagaacatgcct
catccatgggagcaagccaaagaagttaaagttttatatcacacttcaggagccataaca
tttgtgaatgaaacaccaagagtaatagagcctgtatatactgcccaatggtcagctact
tggatagcaatgaggagagaaaaacgagatagaacacattttaaaagaatgagatttcca
cctttcgatgatgacgaaccacctctgtcatatgaacagcacatagaaaatatcgagcca
ctggatcctataaatcttcccttagactctcaagatgatgaatatgttaaagattggctc
tacgattcccggcccttggaggaggatagtaaaaaggtcaatggtacatcttataaaaag
tggagttttgatttacctgaaatgtcgaacttatataggttatcaacgccacttagagat
gaagtaactgacaaaaattactattatcttttcgataaaaaatctttttttaacggtaaa
gcccttaataacgcaatccctggaggtcctaaatttgaacctttatacccaagagaagag
gaggaagattataacgaattcaactctatagatagagtaatatttagggttcctattaga
agcgaatataaggtagcgtttcctcatctatataattcccggccccgttcagtgcgcata
ccatggtataataatccagtgtcgtgtattatccagaacgatgaggagtacgacacgcct
gcacttttttttgatccatcgctgaacccaatacctcactttattgataataattcatcc
ctcaacgtatcaaatacaaaggaaaacggtgatttcactttacctgaagattttgcacct
cttttggctgaagaagaagaacttattttgccaaatacaaaagatgcgatgtcgttatat
cattcaccttttccatttaatagaactaaaggaaaaatggtgagagcacaagatgttgcc
ctggctaaaaaatggtttttgcaacatcctgacgaggagtatcccgttaaagttaaggtc
tcttaccaaaagctcttgaagaactacgtgctaaatgaattgcaccctactttgccaaca
aaccacaacaaaactaagttattgaagagtttaaaaaataccaagtattttcaacaaact
acaattgattgggtagaggcaggactccagctatgtcgacaaggacacaatatgttaaat
ttattaatccacagaaagggcctaacttatttacatctcgactacaatttcaatttaaaa
ccaactaaaaccttaaccacaaaagaacgtaaaaagtcaagacttggaaactcatttcat
ttgatgcgtgaattgctaaaaatgatgaaactgattgtagatacacatgtgcagtttagg
ttaggaaatgtagatgccttccagttagcagatggtatacattatattttgaaccacata
ggacaattgaccggtatttatcgttataaatataaagtaatgcatcaaatccgcgcatgt
aaagatctgaaacatatcatatattataagtttaataaaaatttgggaaaaggacctggt
tgtggattttggcaacctgcgtggagagtgtggctaaatttcttaagaggcactatacca
ctactcgaaagatatattggaaaccttatcacacgtcaatttgaaggccgttctaatgaa
attgtcaaaactacaactaaacaaagacttgacgcctactacgatcttgagttacgaaac
tcggtcatggatgacattttagaaatgatgcctgagagtattcgacagaaaaaggcaaga
actatactgcaacatttaagtgaggcttggagatgttggaaggctaatattccatgggat
gttcctggtatgccagccccaatcaaaaaaataattgaacggtatataaaatccaaagct
gatgcctgggtatctgcagctcattacaatcgagaacgtataaagcgtggagctcacgtc
gaaaagactatggttaaaaaaaatctggggcgtttaacgagactttggatcaaaaatgag
caggaacgtcaaaggcaaatacagaaaaacggtcccgaaattactcccgaagaggctacg
accatattttctgttatggttgagtggcttgaatcaaggagcttttcaccaataccattt
ccacctttaacttacaaaaatgatactaagatattagttcttgccctcgaagacctaaaa
gatgtctacgcatcaaaagtacgtttaaatgcatctgaaagggaagaacttgcgttgata
gaggaggcttatgataatcctcacgatactttgaacagaatcaaaaagtacttgttgacc
cagcgagtttttaagcctgttgatataaccatgatggaaaactatcaaaacatttcccct
gtttattcagttgatcccttggaaaagattaccgatgcatatcttgatcagtatttatgg
tacgaagctgaccaacgaaagcttttcccaaactggattaaaccaagtgattcagagata
ccacctcttctggtatacaagtggactcagggtataaacaacctatctgaaatttgggat
gtatccagaggccaatctgcagttttgcttgagactactttgggtgaaatggccgaaaaa
attgactttactttacttaatagattacttcgcctgattgtagatcctaatattgctgac
tatatcactgcaaaaaataatgttgttatcaactttaaagatatgagtcacgtcaacaaa
tatggcttaatacgcgggttgaagttcgcttctttcatattccaatattacggactagtt
atagatcttttactattgggtcaggaaagggctacagatttggctggtccagctaacaat
ccaaatgaatttatgcaattcaagagcaaagaagtagaaaaggcacatccgatcagactt
tacaccagatatttagatcgtatatatatgctttttcactttgaagaagatgagggagag
gaattgactgatgaatacttggcagagaatccagatccaaactttgaaaacagcatcgga
tacaataatagaaaatgctggcccaaagattcgcgcatgaggctaatacgtcaggacgtt
aacctagggcgagcagtgttttgggaaattcaaagtagggtgccaacttcgttaacgtca
attaaatgggaaaatgcttttgtttccgtatacagtaaaaacaatccgaacttactcttc
tctatgtgtggttttgaagtcagaatattaccaagacaaagaatggaagaggtggtttct
aacgatgaaggtgtttgggatttagttgacgaaagaaccaagcaaagaactgcaaaagca
tatttaaaggtatctgaagaagaaatcaaaaaatttgacagcagaataagaggcatattg
atggcctccggttcaaccacttttactaaagtggccgctaaatggaacacttcactgata
tcccttttcacatactttagagaagccattgttgccacggagccgttattagatatcctg
gtgaaaggagaaacaagaattcaaaaccgtgtcaaacttggtttaaattcgaaaatgcca
acaagatttccacctgctgttttttatacaccaaaagaacttggtgggttgggtatgatt
agtgcttctcatattttaattcctgcatctgacttaagttggtcaaaacagaccgatact
ggaattacgcattttcgtgctggtatgacgcacgaggatgaaaaattaatcccaactatc
ttccgttacatcactacttgggaaaatgaatttttagactctcaaagggtgtgggccgag
tatgcaacgaaaaggcaggaagctattcagcagaataggaggttagcttttgaagaactt
gaaggatcgtgggatcgtggtatacctcgtattagcactttatttcaaagagatcgacat
actctagcgtatgacagaggtcacagaatccgtagggaatttaaacagtactctctagag
agaaacagccccttttggtggacaaactcccaccatgacggtaaattatggaatttaaat
gcctatagaactgatgtgattcaagccctaggaggtattgaaacaattttggaacacact
ttatttaaggggactggttttaattcatgggaaggtttgttttgggaaaaggcgtccggg
tttgaggattccatgcaatttaagaagctaactcatgctcaaagaactggtttaagccaa
attccaaatcgtagatttaccttatggtggtcaccaactattaacagagcaaatgtctat
gtcggtttcttggtgcaattggatctgactggtatcttcctccatggtaaaattcctacg
ttaaaaatatctttaattcaaatattccgtgctcatttgtggcaaaaaatacatgaaagt
atagtttttgatatttgtcaaattctcgatggtgagctagatgttttgcaaattgaatct
gtgactaaagaaacagtgcatccccgcaaatcgtacaagatgaattcatctgccgctgac
ataactatggaaagtgttcatgaatgggaagtttcaaaaccctccctattacatgaaaca
aatgactcatttaagggattgattaccaacaaaatgtggtttgatgtacaattgagatac
ggtgattatgattctcatgatatatctcgttatgtgagggcaaaattcctcgattataca
acagataatgtcagcatgtatccctccccaacaggtgttatgatcggtatcgatttggct
tataacatgtatgatgcctatggtaattggttcaacggattaaaacctttgatacaaaat
agtatgagaacaattatgaaagctaacccagcattatatgtccttcgtgaacgtattaga
aaaggtcttcaaatatatcaatctagtgtacaggaaccatttttaaactcctcaaactat
gccgagttattcaataacgacattaaactcttcgttgacgacactaatgtgtatagagtt
actgtccacaagacttttgaagggaacgttgctacaaaagcaattaatggttgcattttc
actttaaatccaaagactgggcatctgtttctgaaaattatccatacctctgtatgggcc
ggtcaaaaacgtttaagccaattggccaaatggaaaacagctgaggaagttagtgctctt
gtgagatctttgcccaaagaagagcagccaaaacaaattatcgtcacaagaaaggcaatg
cttgatcctttagaggttcacatgcttgactttcctaacatagcaatcaggccaacagag
ctgcgactaccattttcagctgcaatgtcaatagataaactttctgatgttgtgatgaaa
gctactgaacctcagatggttctgtttaacatttatgatgattggttagaccgtatttca
tcgtacactgcattttctagacttacactacttttaagagctttaaagacgaacgaggaa
agtgccaaaatgattctactcagtgaccccacgatcactatcaaatcgtaccatttatgg
ccttcattcactgatgaacaatggatcactatcgaatctcaaatgagagatttgattttg
actgagtacggcagaaaatacaatgtcaatatatctgccttaactcaaacggaaattaaa
gatattatattgggtcaaaatatcaaggcaccatctgtgaagagacaaaaaatggctgaa
ttagaagctgccaggtcagaaaagcagaacgacgaagaagctgcaggtgcatcaactgtt
atgaaaactaaaactatcaatgcgcaaggtgaggagatagttgtagtagcttccgctgat
tacgaaagtcaaacgtttagttcaaagaatgaatggagaaaatctgcaattgctaataca
ctattatatttgaggttaaaaaacatttatgtttcggctgatgatttcgtggaggaacag
aatgtttacgtccttccaaaaaatttattaaagaagtttattgagatatccgatgtgaaa
atccaggtggcggcctttatttatggtatgtcagcaaaagatcatccgaaggtgaaagaa
atcaagactgttgtgctggtacctcaattaggccacgtaggatccgttcagataagcaac
atccctgacatcggagaccttccggatactgaaggccttgaactactcggttggatccat
acccagacagaagaacttaaattcatggctgcgtctgaagtagcaactcattctaaactt
tttgcggataagaaaagagactgcattgatatttcaattttttccaccccgggatcagta
tcattaagcgcttataacctgaccgacgaaggttaccaatggggtgaagaaaataaggat
ataatgaacgtgctatcggaagggtttgagcctactttcagcacgcatgcccaattactt
ctctctgaccgtatcacaggtaattttataattccatctggaaacgtttggaactacaca
tttatgggaacagcatttaaccaagaaggtgactacaattttaaatacggcattcctttg
gaattctataatgagatgcatcgtccagtacactttttacagtttagcgaattggcgggg
gacgaagagttagaggccgaacaaatcgatgtatttagctga
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integrated database retrieval system
