Saccharomyces cerevisiae (budding yeast): YIL143C
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Entry
YIL143C CDS
T00005
Symbol
SSL2, LOM3, RAD25
Name
(RefSeq) TFIIH/NER complex ATPase/helicase subunit SSL2
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03022
Basal transcription factors
sce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
YIL143C (SSL2)
09124 Replication and repair
03420 Nucleotide excision repair
YIL143C (SSL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YIL143C (SSL2)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YIL143C (SSL2)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YIL143C (SSL2)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
YIL143C (SSL2)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
YIL143C (SSL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
SBP_bac_6
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
854663
NCBI-ProteinID:
NP_012123
SGD:
S000001405
UniProt:
Q00578
Structure
PDB
PDBj
LinkDB
All DBs
Position
IX:complement(80510..83041)
Genome browser
AA seq
843 aa
AA seq
DB search
MTDVEGYQPKSKGKIFPDMGESFFSSDEDSPATDAEIDENYDDNRETSEGRGERDTGAMV
TGLKKPRKKTKSSRHTAADSSMNQMDAKDKALLQDTNSDIPADFVPDSVSGMFRSHDFSY
LRLRPDHASRPLWISPSDGRIILESFSPLAEQAQDFLVTIAEPISRPSHIHEYKITAYSL
YAAVSVGLETDDIISVLDRLSKVPVAESIINFIKGATISYGKVKLVIKHNRYFVETTQAD
ILQMLLNDSVIGPLRIDSDHQVQPPEDVLQQQLQQTAGKPATNVNPNDVEAVFSAVIGGD
NEREEEDDDIDAVHSFEIANESVEVVKKRCQEIDYPVLEEYDFRNDHRNPDLDIDLKPST
QIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLCTSSVSVMQW
RQQFLQWCTLQPENCAVFTSDNKEMFQTESGLVVSTYSMVANTRNRSHDSQKVMDFLTGR
EWGFIILDEVHVVPAAMFRRVVSTIAAHAKLGLTATLVREDDKIGDLNFLIGPKLYEANW
MELSQKGHIANVQCAEVWCPMTAEFYQEYLRETARKRMLLYIMNPTKFQACQFLIQYHER
RGDKIIVFSDNVYALQEYALKMGKPFIYGSTPQQERMNILQNFQYNDQINTIFLSKVGDT
SIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYST
KRQAFLVDQGYAFKVITHLHGMENIPNLAYASPRERRELLQEVLLKNEEAAGIEVGDDAD
NSVGRGSNGHKRFKSKAVRGEGSLSGLAGGEDMAYMEYSTNKNKELKEHHPLIRKMYYKN
LKK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgttgaaggctaccaacctaagagcaaggggaaaatctttccagatatgggt
gagtcctttttctcatcagatgaggattcaccagctactgatgcagagatcgatgagaac
tatgatgataacagggaaacgtcagaaggacgtggagaaagggataccggcgccatggta
acagggttgaagaagcctcggaaaaagaccaagagtagcaggcatacagcggcggattcc
tctatgaatcaaatggacgctaaggataaagcgcttttgcaggacactaatagcgatata
ccagcagatttcgttccagattccgtctctggaatgttcagaagccatgactttagttat
ttgcggttaagaccagaccatgcttccaggcccctttggatctcgccaagtgacggtagg
atcattctggagagtttctctccattagcagaacaggctcaggactttctggtcaccatt
gcagagcctataagtagaccctcccatattcatgaatacaagatcacagcatactctttg
tatgcagctgtttctgtagggttggagacggatgatatcatttcagttctggatagatta
tccaaagtacccgttgctgaatcgataatcaacttcattaaaggggctaccatttcatac
ggtaaagtgaaactagttattaagcataatagatatttcgtggagactacacaagcagat
attctgcaaatgttgctgaatgattccgtcatcgggcccctaagaatagatagcgatcat
caagtacagccaccagaggatgtactacagcaacaacttcagcaaaccgctggaaaaccc
gctactaatgttaatccgaacgatgtggaagccgtgtttagtgcagttataggtggtgat
aatgagcgggaagaagaagatgatgatattgatgccgttcactcctttgaaattgccaat
gagtctgttgaagtcgtaaagaaaagatgtcaagaaatcgattatcccgtgttggaagaa
tacgactttagaaacgaccatagaaacccggatttagatattgatttgaaaccttccact
caaatcagaccctatcaagaaaaatcgctgagtaaaatgtttggtaatgggcgtgctcgt
tcagggattattgttttgccatgtggcgcaggtaaaactttggtcggtattaccgcagca
tgtactataaaaaaatccgtaattgttttatgtacttcatcagtctccgtcatgcaatgg
aggcagcaatttttacaatggtgtaccttacaacctgaaaattgtgctgttttcacctct
gataataaggaaatgttccagacagaatccggtttggttgtttccacttattcaatggtg
gcaaacacaagaaacaggtctcatgattcacaaaaagttatggatttcttgaccggtagg
gaatgggggttcattattcttgacgaagttcatgtggtgcccgccgcaatgttccgtagg
gtggtctccaccatcgcagcacacgccaaattgggactgaccgcaacgctggttagagaa
gatgataaaattggtgatctgaattttttaattggtccaaaactttatgaagcaaattgg
atggaattatcccaaaaaggacatattgcaaatgtccaatgtgcagaggtttggtgtccc
atgacagcagaattttaccaagagtatttaagagaaactgcaaggaaaagaatgctactg
tatatcatgaatccaacaaagtttcaggcatgccaattcttaattcaatatcacgaaagg
aggggtgataagatcatcgttttttcagataatgtttacgccttacaagaatatgctttg
aaaatgggaaaaccatttatttatggttccacaccacaacaagagcgtatgaacattctg
caaaatttccagtacaatgaccaaatcaataccatatttctatcaaaagttggtgatact
tccatcgatttaccagaagctacctgtttaattcaaatatcttcgcactatgggtctcgt
cgtcaagaagcccaaagattaggaagaattttaagagctaaaagacgtaatgacgaaggt
ttcaatgcgttcttttattctctggtttctaaggatacgcaagaaatgtactactcaaca
aagagacaagcgtttttggtagatcaaggttacgcattcaaagtcattacacatttacac
ggaatggagaacattccaaatttggcatatgcttcacccagagaacgtagagagctattg
caagaagtattattgaagaacgaagaagctgctggtatcgaggtcggtgatgacgctgac
aattctgttgggagaggttcaaatggccacaaaagatttaaatcaaaggccgttagaggt
gaaggttcattgtctggtcttgctggcggtgaagatatggcatatatggaatacagtacc
aataaaaacaaagaactgaaggaacatcatccattaatcagaaagatgtattataagaat
ttgaagaagtga
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