Saccharomyces cerevisiae (budding yeast): YIR001C
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Entry
YIR001C CDS
T00005
Symbol
SGN1, RBP1, RBP29
Name
(RefSeq) Sgn1p
KO
K14396
polyadenylate-binding protein 2
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
YIR001C (SGN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YIR001C (SGN1)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
YIR001C (SGN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
854817
NCBI-ProteinID:
NP_012266
SGD:
S000001440
UniProt:
P40561
LinkDB
All DBs
Position
IX:complement(356143..356895)
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AA seq
250 aa
AA seq
DB search
MSQEEKVDAKATLKTEISNNKKNDKQELELDELVGKLSIEGTPQVSQKLSKEEKHAHQLE
ADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREK
ALQLNGGELKGKKIAVSRKRTNIPGFNRHYNSQNQYFQQWQWNYPLMAYPNPDTFPYYPP
YPPNQSPNQNFGYNKNNYYRSPYNNKNRTFQKKHFNSAKDSTKNIRSTSQKPVVMPSDNV
KSSTQEKDSK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggaagagaaagtggatgctaaggcaaccttaaagactgaaatttcgaacaat
aaaaagaacgacaagcaagagctcgagctggatgaacttgtgggtaaactatctatcgag
ggcactccacaggtgtcgcaaaagctaagcaaggaggaaaaacacgctcatcaacttgaa
gctgactcgcgttctatctttgtcggtaacatcactccggatgtcaccccagagcaaata
gaagatcatttcaaagactgtggccagataaaaagaataacacttctttatgataggaat
acgggaacaccaaaaggctacggctatattgaatttgaaagtccggcatacagagaaaaa
gccctgcaattaaatggaggagaacttaaaggcaaaaaaattgctgtctccagaaaaaga
actaacattccaggatttaataggcattacaactcgcaaaaccagtatttccaacaatgg
caatggaattatcccttaatggcctaccccaatcccgataccttcccttattacccaccg
taccctccaaatcagtctccaaatcaaaatttcggatataataagaacaattattatagg
agtccttacaataacaagaatagaaccttccaaaaaaaacacttcaacagtgccaaagac
tctacaaaaaatattagatctacttcccaaaaacctgttgtcatgccgtctgacaacgtt
aaaagttctacccaagaaaaagattcgaaataa
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