Saccharomyces cerevisiae (budding yeast): YJL140W
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Entry
YJL140W CDS
T00005
Symbol
RPB4, CTF15
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03020
RNA polymerase
sce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
YJL140W (RPB4)
09124 Replication and repair
03420 Nucleotide excision repair
YJL140W (RPB4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YJL140W (RPB4)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YJL140W (RPB4)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
YJL140W (RPB4)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
YJL140W (RPB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Rtf2
Spo16_C
GAGA_bind
Cellulose_synt
FYDLN_acid
Motif
Other DBs
NCBI-GeneID:
853301
NCBI-ProteinID:
NP_012395
SGD:
S000003676
UniProt:
P20433
A0ABF7PIV1
Structure
PDB
PDBj
LinkDB
All DBs
Position
X:150961..151626
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AA seq
221 aa
AA seq
DB search
MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK
EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE
KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL
GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttctacatcaacctttcaaacaagacggagaagattgaagaaagtggaggaa
gaagaaaatgcagctactctacaactgggccaggaattccagctgaaacagataaatcat
cagggtgaagaggaggaattgattgccttgaacctaagtgaagccaggttagtaatcaaa
gaagctcttgtagaacgtaggagagcatttaaaagatcgcaaaaaaaacacaagaagaag
catttgaagcacgaaaacgccaatgatgaaactacggcagtagaggatgaagatgatgat
ctggatgaagatgacgtcaacgctgatgatgatgattttatgcattctgaaactagggag
aaggagttggagtctatcgacgttctgttagaacagacaacgggaggaaataataaagat
ttgaaaaataccatgcagtatttaacaaatttctcccgatttagagaccaagaaaccgtc
ggggcagttatacagcttctgaaaagcactgggttacatccttttgaagtggcgcaacta
ggttctttggcctgtgacacagctgatgaagcaaagactttaattccaagcttaaacaat
aaaatatcagacgatgagttggaaaggatactaaaggaattgtcaaacctagaaacactc
tattaa
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