Saccharomyces cerevisiae (budding yeast): YJR033C
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Entry
YJR033C CDS
T00005
Symbol
RAV1, SOI3
Name
(RefSeq) Rav1p
KO
K24155
rabconnectin-3a
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
YJR033C (RAV1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YJR033C (RAV1)
Membrane trafficking [BR:
sce04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
YJR033C (RAV1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
YJR033C (RAV1)
RAVE complex
YJR033C (RAV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
TPR_GEMI5
Endostatin
Motif
Other DBs
NCBI-GeneID:
853490
NCBI-ProteinID:
NP_012567
SGD:
S000003794
UniProt:
P47104
Structure
PDB
PDBj
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All DBs
Position
X:complement(492378..496451)
Genome browser
AA seq
1357 aa
AA seq
DB search
MSLNFLPGRPNATPQTACQATWQNHTIFAYCSGNNLIILTNKFTRLQTIYTQSDCTAVDI
NSQNGFIALSFHNRVLIYKPIHQIMQNPKWTQCCQLFHDDTPVNCLRWSSDNELAIGSDF
LSFWKIKDNFGVYQPILQWNQKQPKPVYNVIISQDSQLIVSIGKYDCNAKLWKRVSIVGE
QAIFNLTMLPHPKPITAMRWKKEPDQVSKNNTASHALYTLCEDKVLRIWSCFEMEKNHTV
QIWGEVPLSPTQKFCVIIDNWIIRQTLSVKDSEIFDISDSDIVILGSMTGEMEVLALNNL
SQDPPKPMTKKTISHKKVKKATMLNDTRYLYLPEIQPYDNVKGKLSFLVHDLQGVIRHLL
IDILQLINNKTEDLSAALEHKFTGHNKSVQKLVRSSDGEALLTTSRFSENGVWYPQKLNH
GVSLRLQNTIQTESPIKFAVVHELGKQVICLLENGALQAWECPTNRKEDSEQKQSYLRVE
TRLKEEKKIHPIVMLNTPEPKHSHERHFTALIFSDGSIKAFEVSLTRGIFEVKSDSLDID
GDDIYKISIIDPVHQTFVSNRPLISLITKKGLTRTYKAIVNYNDRHVQWIKACEINTGIM
NCTCIRGSSTGKLCIVNSTGKVMSLWDLNRGVLEYEETFHNPIEDIDWTSTEYGQSIVSI
GFTGYALLYTQLRYDYTNNTPSYLPIEKIDITAHTAHNIGDSVWMKNGTFVVASGNQFYI
KDKSLDLTDPFTYQSIGSRKILSNDILHLSSVLNGPLPVYHPQFLIQAIYANKLQLVKEL
LLRLFLALRKLDFESQDVSNLDSNLGMDPLKYFIAKDRDYPVESFPDPYPCFNKTVSLAL
TEQLTKTTLPYLTRHQQITLITVIEAVDEVTKNENIVDYNGVRFLLGVKLFLSHKNIQKS
ILMRDVSWALHSDNKEILLSSIDRHITSWNRAREYRIAYWIKEQDLVKKFEDIAKYEFSK
DDKRDPSRCAIFYLALKKKQILLSLWKMAIGHPEQQKMVRFISNDFTVPRWRTAALKNAF
VLLSKHRYMDAAVFFLLTDSLKDCVNVLCKQVHDMDLAIGVCRVYEGDNGPVLGELLTAQ
MLPETIKENDRWKASFIYWKLRKQEVAIKALLTAPIDLENNSSIVDKEVCVNRSFLVEDP
ALLYLYNHLRNRNLKYFIGSLNVEAKIECTLILRVTDILCRMGCNYLAVSLVKNWKFIER
NSIPVQKLLKSPTKDRAYSAIGAMASEPISTARMRPSLFDKFGSPSASDIESPNPKLPNS
LLDDFLQPPPNSTSSNSLAQSSSSAPRSILDEFVSPSYSQHKENLTPKAPNDSVGETDNS
ENRKDKLSKDILDDLSSQKPQKPKKSAITKNLLDDFV
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgaactttcttccaggacgccccaatgctacccctcagacagcttgtcaagca
acatggcaaaatcataccatctttgcatattgttcagggaataatttaatcatacttacc
aacaaattcactaggttacagaccatatatacacaatcagactgtactgcggtcgatatt
aacagccagaatggattcattgccctttccttccacaatagggtgctcatctacaagccc
attcatcaaattatgcagaatcccaagtggacccaatgttgccagttgttccatgatgac
acgccagtaaactgcctaagatggtcttctgataatgagttagccattggatctgatttt
ctttctttttggaaaattaaggataattttggtgtgtatcaacctattttgcagtggaac
caaaaacagcctaaacctgtttataatgtgattatatcacaagattcgcagctgatagtc
agtattgggaagtacgactgtaatgctaaactatggaagcgtgtttcaatagtcggagaa
caagccatctttaaccttactatgttgcctcatccgaaacctataactgcaatgcggtgg
aaaaaagagccagaccaggtgagtaaaaacaacactgcctctcatgctctttatacgctg
tgtgaagataaagttctgagaatatggtcttgttttgaaatggagaaaaaccatactgtg
caaatatggggtgaagtgcctctttcccccacgcagaagttctgcgtgataatagacaat
tggatcattaggcaaactctcagtgtgaaagactcggaaatctttgatatatctgactca
gacattgttattctgggttcaatgactggggaaatggaagttttggctttgaataatctt
tcccaagatcctccaaaaccaatgactaaaaagaccatttcccataaaaaagtcaagaaa
gcaactatgctaaacgatacaagatatttgtacctccccgaaatacaaccctatgacaat
gtgaagggcaaactttcttttctcgtccacgatttacaaggtgtaatcagacatttacta
atcgacattctgcagcttataaacaataaaaccgaagatctgagtgccgctttagagcac
aaatttacgggacataacaaatctgtgcagaagttggtaagaagcagcgacggcgaagct
ttattaaccacttcgagattctcagaaaatggcgtttggtacccacaaaagttaaaccat
ggggtttcactgcggttacaaaatacaatacaaacagaatctcccataaaatttgcagtt
gtacatgagttgggtaaacaggtcatctgtcttctcgaaaatggggctttacaagcctgg
gaatgtccaacgaatcgtaaggaggacagtgaacagaagcaatcatatttacgtgtggaa
acgagactgaaagaggagaaaaaaatccatccaatagttatgttaaatacacctgagcca
aagcatagtcatgagcgtcatttcaccgcgttaatattctctgatggttcaatcaaagct
tttgaagtctctttaacacgtggtatttttgaagtaaagtctgattcattagatatcgat
ggtgacgacatatacaagatctccattattgaccctgtacatcaaacttttgtgagtaac
aggcctttgatttctttgattactaaaaaaggtcttaccagaacgtataaagccatcgtt
aattataatgataggcatgtccaatggatcaaggcatgtgaaattaacaccggaataatg
aattgtacatgtattagaggatcatctacaggtaagttatgtattgttaattctactggt
aaagtaatgtcactatgggacctgaacaggggagttcttgaatacgaagaaacatttcat
aatcctatcgaggatatagattggacaagcacggaatatggccaaagcattgtctctatc
ggatttacaggatacgctttactttatactcaattaaggtatgattacacgaacaacaca
cctagttacctacctattgaaaaaattgatatcacagcacatacagctcataatataggt
gactccgtatggatgaaaaatggcacgtttgttgttgcttccggaaatcaattttacatc
aaggataaatctctggatttgactgatccatttacgtaccaatcaattggttcaagaaaa
attttatcaaatgatattctccatttaagtagtgttttaaatggtccacttccagtttat
catccacaatttttgattcaagccatttatgcgaataagttacaacttgtcaaggagctg
ttattaagattgtttttagcgttaagaaaattagactttgaatcgcaagatgtatctaat
ttggattccaatctaggaatggatccattaaagtactttattgctaaagatagagactat
ccggtcgaatctttccctgatccatacccctgtttcaataagacagtgtctctagcactt
actgagcaactaacgaaaacaactttgccttatctaacccgccaccagcagatcacgctt
atcacagtcattgaagcagtggatgaagtcaccaaaaatgagaatatagtagattacaac
ggtgttaggttcttgttgggcgtgaagttatttttatcacataaaaatattcaaaaaagc
atattgatgagggatgtgtcttgggcattgcactcagacaataaagaaatattattatct
tctattgaccgccacataacctcatggaatcgcgctcgagaatatagaatagcctattgg
attaaggagcaggacttggtgaagaaattcgaggatattgcaaaatatgaattttccaaa
gatgataagagggatccaagccgttgtgctattttttatcttgcgttgaagaaaaaacag
atactattgagcttgtggaagatggctattggtcatcctgagcagcaaaagatggttaga
tttatcagtaatgatttcactgtaccgaggtggagaacggcagcactcaaaaatgctttt
gttctgctaagtaagcatagatatatggatgcagcagttttctttctcttaactgactct
ctaaaagattgtgtcaacgttctttgcaagcaagtgcatgatatggatttggcaatcggt
gtatgtcgtgtttatgaaggtgataatggacccgtgttgggagagctattgacagcgcaa
atgctacctgaaacaataaaggagaatgatagatggaaagcaagtttcatttactggaaa
ttgagaaagcaggaagtggctattaaagctttgctgactgctccgattgatttagaaaac
aactcaagcattgttgataaggaagtctgtgttaacagatcattccttgttgaagaccct
gctttgctctatctatacaatcacctgagaaacagaaacttgaagtatttcattggatct
ctaaatgttgaagcaaaaatcgagtgtactctgatcttaagagttactgatattctttgc
cgaatgggttgcaattacctggcggtttcacttgtgaagaattggaagttcatcgaaaga
aattccataccagttcagaagctattaaagagccccaccaaggatagagcatattctgct
attggcgccatggcgtctgaaccaatttctactgctaggatgaggcccagtctttttgat
aagtttggctcgccaagtgcttcagatatagagtcacctaatccaaagttaccaaatagc
ttattagacgacttcttgcaaccaccaccaaatagcacttcttcaaattccctcgctcaa
agttcttcttctgcacctagaagtatactggatgagttcgtctctccttcatattctcag
cataaagagaatttaactccaaaagcgccaaacgactctgtgggtgaaacagacaactca
gaaaataggaaagataaactctctaaggacatattagatgatctttcatcacaaaagcca
cagaagccaaaaaaatctgctattaccaagaacttactagatgactttgtatga
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