Saccharomyces cerevisiae (budding yeast): YJR042W
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Entry
YJR042W CDS
T00005
Symbol
NUP85, RAT9
Name
(RefSeq) Nup85p
KO
K14304
nuclear pore complex protein Nup85
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
YJR042W (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YJR042W (NUP85)
03036 Chromosome and associated proteins [BR:
sce03036
]
YJR042W (NUP85)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
YJR042W (NUP85)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
YJR042W (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
853499
NCBI-ProteinID:
NP_012576
SGD:
S000003803
UniProt:
P46673
Structure
PDB
PDBj
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All DBs
Position
X:514055..516289
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AA seq
744 aa
AA seq
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MTIDDSNRLLMDVDQFDFLDDGTAQLSNNKTDEEEQLYKRDPVSGAILVPMTVNDQPIEK
NGDKMPLKFKLGPLSYQNMAFITAKDKYKLYPVRIPRLDTSKEFSAYVSGLFEIYRDLGD
DRVFNVPTIGVVNSNFAKEHNATVNLAMEAILNELEVFIGRVKDQDGRVNRFYELEESLT
VLNCLRTMYFILDGQDVEENRSEFIESLLNWINRSDGEPDEEYIEQVFSVKDSTAGKKVF
ETQYFWKLLNQLVLRGLLSQAIGCIERSDLLPYLSDTCAVSFDAVSDSIELLKQYPKDSS
STFREWKNLVLKLSQAFGSSATDISGELRDYIEDFLLVIGGNQRKILQYSRTWYESFCGF
LLYYIPSLELSAEYLQMSLEANVVDITNDWEQPCVDIISGKIHSILPVMESLDSCTAAFT
AMICEAKGLIENIFEGEKNSDDYSNEDNEMLEDLFSYRNGMASYMLNSFAFELCSLGDKE
LWPVAIGLIALSATGTRSAKKMVIAELLPHYPFVTNDDIEWMLSICVEWRLPEIAKEIYT
TLGNQMLSAHNIIESIANFSRAGKYELVKSYSWLLFEASCMEGQKLDDPVLNAIVSKNSP
AEDDVIIPQDILDCVVTNSMRQTLAPYAVLSQFYELRDREDWGQALRLLLLLIEFPYLPK
HYLVLLVAKFLYPIFLLDDKKLMDEDSVATVIEVIETKWDDADEKSSNLYETIIEADKSL
PSSMATLLKNLRKKLNFKLCQAFM
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgatgattcaaatcgattacttatggacgtcgatcaatttgattttttggac
gacggaacggcgcaacttagtaataacaagaccgatgaagaagaacaactatataaaagg
gacccagtcagcggggctatcctggtccctatgactgtaaatgatcaaccgattgaaaaa
aatggcgacaagatgcctttaaagttcaagctggggccactttcttaccaaaatatggca
ttcataactgcaaaagataaatataagctttatcctgttagaattcctagattagatacc
agcaaagagttttctgcatacgtatcaggtttatttgaaatttaccgtgatttaggtgat
gacagagtgtttaatgtaccaacgattggagttgttaattctaatttcgcgaaggagcat
aatgcaacagtaaatctggccatggaggcgattctgaatgaattggaagtgtttattggt
agagtcaaggatcaggatggaagagtgaaccgattttatgagttggaagaatctttaacc
gttttaaactgtctgaggacaatgtacttcatattagatggtcaggatgtagaggagaac
agatcagagtttattgagtcattgctaaactggattaatagatcagacggtgaaccagat
gaagaatatattgaacaagtgttttcagtgaaggattctacagcaggtaaaaaagtgttc
gaaacacaatatttctggaagcttttgaatcagcttgttttaagaggcctgctctcccaa
gctataggttgcattgaaagatcagatcttttaccatatttgagtgatacatgtgccgtt
tcatttgatgcagtaagtgactccatcgaactcctgaaacaatatccaaaagattcgtcc
agtacatttagagaatggaaaaatttggtgctaaaattaagtcaagcctttggtagttct
gctactgatatttccggtgaattacgggattacattgaagatttcttgttagtaattggt
ggaaatcaacgaaaaattctgcagtattcaaggacgtggtatgagtccttttgtgggttt
ttattatactatatcccctcattagaactatcagcagaatatttacaaatgtcactggaa
gctaacgtcgtagacataacaaatgattgggaacaaccatgcgtcgacatcattagtggt
aagatacactcaattttaccggtaatggaatctttagatagttgcacagcagcatttacc
gctatgatttgtgaagcaaaaggtttgatagagaatatttttgagggtgaaaaaaatagc
gatgattatagtaatgaagacaacgaaatgcttgaagatctattctcttataggaatggt
atggcatcttatatgctaaatagcttcgcttttgagttgtgttcactgggtgataaggaa
ctatggcccgttgccattggattgatagccttatctgcaacagggacgagaagtgcaaag
aaaatggtgattgcagaattacttccacactacccatttgttacgaatgatgacattgaa
tggatgctaagtatatgtgtagaatggagactaccagaaatagcgaaggaaatatacacc
acgttgggtaatcaaatgttatcggcacacaacataattgaaagtatcgcaaattttagt
agggcgggcaaatatgaactggtaaagtcatattcgtggctattatttgaagcttcgtgc
atggagggccagaagttggacgaccctgtgttgaatgccattgtgagcaaaaactctcct
gcagaggatgacgttataataccacaagacattttagattgtgtagtgacgaattctatg
cgtcaaactttagcgccatatgctgttctgtcacaattctatgagctgagggacagagaa
gattggggccaagcgctgcgcctattgcttttgctgattgaattcccttatttaccaaaa
cattacttggttttgcttgtggcgaaattcctgtacccaattttccttttagatgataag
aagctaatggatgaagattcagtggcgacagtcattgaagttatagaaactaaatgggat
gacgctgatgaaaaaagttcaaacttatatgaaaccattattgaagcagataaaagctta
cctagtagcatggcaacacttttgaaaaatttaagaaagaaactaaatttcaaattatgt
caagcgttcatgtaa
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