KEGG T00005: YKL002W

Saccharomyces cerevisiae (budding yeast): YKL002W

Entry

YKL002W           CDS       T00005

Symbol

DID4, CHM2, GRD7, REN1, VPL2, VPS14, VPS2, VPT14

Name

(RefSeq) ESCRT-III subunit protein DID4

K12191

charged multivesicular body protein 2A

Organism

sce Saccharomyces cerevisiae (budding yeast)

Pathway

sce04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:sce00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    YKL002W (DID4)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sce04131]
    YKL002W (DID4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sce04147]
    YKL002W (DID4)
Membrane trafficking [BR:sce04131]
Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    YKL002W (DID4)
Exosome [BR:sce04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   YKL002W (DID4)
  Exosomal proteins of other body fluids (saliva and urine)
   YKL002W (DID4)
  Exosomal proteins of colorectal cancer cells
   YKL002W (DID4)

SSDB

Motif

Pfam:

Snf7 Ist1 RCAS1_C DUF8835 EDC4_C RRM_MUD2_C

Other DBs

NCBI-GeneID:

853868

NCBI-ProteinID:

NP_012924

SGD:	S000001485

UniProt:

P36108

Structure

LinkDB

Position

XI:join(437778..437837,437906..438544)

AA seq 232 aa
MSLFEWVFGKNVTPQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVA
AAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTM
NLPQLQRISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLN
SQLQSTPQNLVSNAPIAETAMGIPEPIGAGSEFHGNPDDDLQARLNTLKKQT

NT seq 699 nt +upstreamnt +downstreamnt
atgagtttgtttgagtgggtatttggaaagaatgtcactccgcaagagaggttaaaaaaa
aatcaaagggctttagaaaggactcagagggagcttgaaagagaaaagagaaaattggaa
ctacaagataaaaaacttgtatcagaaattaaaaaatcggcaaagaatgggcaagttgca
gctgcgaaagttcaagcaaaagatttagtaagaacccggaattacatccaaaaatttgac
aacatgaaagctcaacttcaggcgatatcattgagaatacaggccgttcgaagtagtgac
caaatgacacgttctatgagcgaggccactggtcttttggctggaatgaacagaacaatg
aatctacctcagttgcaaaggatatcgatggagtttgaaaagcagagtgatttgatgggt
caacgacaggaattcatggacgaagctattgataacgtcatgggtgatgaggtggatgaa
gacgaagaagctgacgaaattgtaaataaagttcttgatgagattggagtggatttgaat
tcacagttgcaaagcacgcctcaaaatctggtttctaatgcgccgatcgcagaaacagcg
atggggattcctgaacctattggcgccggatcagaatttcacggtaatcctgacgatgac
ttgcaagctcggttgaacactttgaagaagcagacttga

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