Saccharomyces cerevisiae (budding yeast): YKL113C
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Entry
YKL113C CDS
T00005
Symbol
RAD27, ERC11, FEN1, RTH1
Name
(RefSeq) multifunctional nuclease RAD27
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03030
DNA replication
sce03410
Base excision repair
sce03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YKL113C (RAD27)
03410 Base excision repair
YKL113C (RAD27)
03450 Non-homologous end-joining
YKL113C (RAD27)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sce03032
]
YKL113C (RAD27)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YKL113C (RAD27)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sce04147
]
YKL113C (RAD27)
DNA replication proteins [BR:
sce03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
YKL113C (RAD27)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
YKL113C (RAD27)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
YKL113C (RAD27)
Exosome [BR:
sce04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
YKL113C (RAD27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
CDKN3
HHH_2
MRPL52
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
853747
NCBI-ProteinID:
NP_012809
SGD:
S000001596
UniProt:
P26793
LinkDB
All DBs
Position
XI:complement(224727..225875)
Genome browser
AA seq
382 aa
AA seq
DB search
MGIKGLNAIISEHVPSAIRKSDIKSFFGRKVAIDASMSLYQFLIAVRQQDGGQLTNEAGE
TTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDLKSHELTKRSSRRVETEKKLAEATTELE
KMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASEDMDT
LCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGVG
PVTALKLIKTHGSIEKIVEFIESGESNNTKWKIPEDWPYKQARMLFLDPEVIDGNEINLK
WSPPKEKELIEYLCDDKKFSEERVKSGISRLKKGLKSGIQGRLDGFFQVVPKTKEQLAAA
AKRAQENKKLNKNKNKVTKGRR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggtattaaaggtttgaatgcaattatatcggaacatgttccctctgctatcaggaaa
agcgatatcaagagcttttttggcagaaaggttgccatcgatgcctctatgtctctatat
cagtttttaattgctgtaagacagcaagacggtgggcagttgaccaatgaagccggtgaa
acaacgtcacacttgatgggtatgttttataggacactgagaatgattgataacggtatc
aagccttgttatgtcttcgacggcaaacctccagatttgaaatctcatgagttgacaaag
cggtcttcaagaagggtggaaacagaaaaaaaactggcagaggcaacaacagaattggaa
aagatgaagcaagaaagaagattggtgaaggtctcaaaagagcataatgaagaagcccaa
aaattactaggactaatgggaatcccatatataatagcgccaacggaagctgaggctcaa
tgtgctgagttggcaaagaagggaaaggtgtatgccgcagcaagtgaagatatggacaca
ctctgttatagaacacccttcttgttgagacatttgactttttcagaggccaagaaggaa
ccgattcacgaaatagatactgaattagttttgagaggactcgacttgacaatagagcag
tttgttgatctttgcataatgcttggttgtgactactgtgaaagcatcagaggtgttggt
ccagtgacagccttaaaattgataaaaacgcatggatccatcgaaaaaatcgtggagttt
attgaatctggggagtcaaacaacactaaatggaaaatcccagaagactggccttacaaa
caagcaagaatgctgtttcttgaccctgaagttatagatggtaacgaaataaacttgaaa
tggtcgccaccaaaggagaaggaacttatcgagtatttatgtgatgataagaaattcagt
gaagaaagagttaaatctggtatatcaagattgaaaaaaggcttgaaatctggcattcag
ggtaggttagatgggttcttccaagtggtgcctaagacaaaggaacagctggctgctgcg
gcgaaaagagcacaagaaaataaaaaattgaacaaaaataagaataaagtcacaaaggga
agaagatga
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