Saccharomyces cerevisiae (budding yeast): YKR094C
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Entry
YKR094C CDS
T00005
Symbol
RPL40B, CEP52B, UB12, UBI2
Name
(RefSeq) ubiquitin-ribosomal 60S subunit protein L40B fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03010
Ribosome
sce04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
YKR094C (RPL40B)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
YKR094C (RPL40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sce03011
]
YKR094C (RPL40B)
04121 Ubiquitin system [BR:
sce04121
]
YKR094C (RPL40B)
Ribosome [BR:
sce03011
]
Ribosomal proteins
Eukaryotes
Large subunit
YKR094C (RPL40B)
Archaea
YKR094C (RPL40B)
Ubiquitin system [BR:
sce04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
YKR094C (RPL40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
DUF2604
Plexin_RBD
UBL_UBAC1
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
853969
NCBI-ProteinID:
NP_013020
SGD:
S000001802
UniProt:
P0CH08
P0CH09
Structure
PDB
PDBj
LinkDB
All DBs
Position
XI:complement(join(617996..618374,618743..618750))
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLKALASKYNCDKSVCRKCYARLPPRATNCRKRKCGHTNQ
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgttaagactttgactggtaagaccatcactttggaagttgaatcttct
gacaccattgacaatgtcaagtccaagatccaagacaaggaaggtatcccacctgaccaa
caaagattgatctttgctggtaagcaattggaagacggtagaactctatctgactacaac
atccaaaaggaatccactttacatttggtcttgagattaagaggtggtatcattgaacca
tctttgaaagccttggcttccaaatacaactgtgacaaatctgtttgtcgtaaatgttac
gccagattaccaccaagagctaccaactgtagaaagagaaagtgtggtcacaccaaccaa
ttgcgtccaaagaagaagttgaaataa
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