Saccharomyces cerevisiae (budding yeast): YLR005W
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Entry
YLR005W CDS
T00005
Symbol
SSL1
Name
(RefSeq) TFIIH/NER complex subunit SSL1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03022
Basal transcription factors
sce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
YLR005W (SSL1)
09124 Replication and repair
03420 Nucleotide excision repair
YLR005W (SSL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YLR005W (SSL1)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YLR005W (SSL1)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
YLR005W (SSL1)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
YLR005W (SSL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
850691
NCBI-ProteinID:
NP_013105
SGD:
S000003995
UniProt:
Q04673
Structure
PDB
PDBj
LinkDB
All DBs
Position
XII:160049..161434
Genome browser
AA seq
461 aa
AA seq
DB search
MAPVVISESEEDEDRVAITRRTKRQVHFDGEGDDRVDQQQQQHSSSHRDRDKHVQRKKKK
RLSNRNLQGSNGGYAWEDEIKRSWDLVKVDDEGDMASLVASIVEARKKRTAKKNITPYQR
GIIRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRNGLAQ
LVSQVSGNPQDHIDALKSIRKQEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLS
TTDPGDIHQTIDSLVSEKIRVKVLGLSAQVAICKELCKATNYGDESFYKILLDETHLKEL
FNEAVTPLPVNKINKGFTLVKMGFPTRIFEDTPTFCSCHSKLVYGGYFCPNCHSKVCSLP
TVCPCCDLMLILSTHLARSYHHLMPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHKNGK
LLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVIT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtagttatttcagaatctgaagaggatgaggatagagttgccattactaga
agaactaagagacaagttcattttgatggcgagggagatgatcgtgtagaccaacagcaa
cagcagcacagttcaagccacagggatagggataaacatgtgcagcgtaagaagaagaaa
aggctctcgaatagaaacctgcaaggttcaaatggtgggtacgcttgggaggatgagatc
aagagaagttgggatttggtgaaagtggacgatgaaggggatatggcatctcttgtggct
agcatagtcgaggccagaaagaaacgtactgctaagaaaaacataacgccataccaaaga
ggtattatcagaagtttaatattaacactagattgtagtgaagctatgttggaaaaggat
ttgagaccaaacaggcatgccatgattatccagtacgccatagattttgtccatgaattt
ttcgaccaaaatccgatatctcaaatgggtattatcataatgagaaacggtttggcacaa
ctggtcagccaagttagcggaaacccgcaggatcacattgatgcgttgaaatccatcagg
aaacaagaaccgaaaggaaacccttcattgcaaaatgcattggaaatggcaagaggcctt
ttattgcctgttcctgcgcattgtacaagggaagtactgattgtatttggtagtctttcc
acaactgatcctggagatattcaccaaactatcgattcgttagtttctgagaaaattaga
gtgaaggttttggggttatcagctcaagtggccatatgtaaagaattatgcaaggcaacg
aattatggtgatgaatccttctataaaattttactcgatgaaactcacttaaaggagcta
tttaacgaggctgttacccctttacccgttaacaaaattaataagggtttcacactcgta
aagatggggtttccgacaaggatattcgaagatactccaactttttgttcgtgccattcc
aagttagtttacggcggatacttctgtcccaattgtcatagtaaagtttgttcattgccc
acagtctgtccatgttgtgacttgatgctaatcctttctacccacctggccagatcatat
caccatctgatgccgttaaaaacatttgcagaagtacctacaacagaaaaatttcgatca
gaagactgctttagttgccagtcaagatttcccatactgaaaaaccataaaaatggtaaa
ctactgacaagttctcgctatcgttgtgaagattgtaaacaagaattttgtgttgactgc
gatgtgttcatccatgaaatccttcataactgcccaggctgtgaatccaagcccgtaata
acttaa
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