KEGG   Saccharomyces cerevisiae (budding yeast): YLR005W
Entry
YLR005W           CDS       T00005                                 
Symbol
SSL1
Name
(RefSeq) TFIIH/NER complex subunit SSL1
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03022  Basal transcription factors
sce03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    YLR005W (SSL1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    YLR005W (SSL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sce03021]
    YLR005W (SSL1)
   03400 DNA repair and recombination proteins [BR:sce03400]
    YLR005W (SSL1)
Transcription machinery [BR:sce03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     YLR005W (SSL1)
DNA repair and recombination proteins [BR:sce03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     YLR005W (SSL1)
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 IBR
Other DBs
NCBI-GeneID: 850691
NCBI-ProteinID: NP_013105
SGD: S000003995
UniProt: Q04673
Structure
LinkDB
Position
XII:160049..161434
AA seq 461 aa
MAPVVISESEEDEDRVAITRRTKRQVHFDGEGDDRVDQQQQQHSSSHRDRDKHVQRKKKK
RLSNRNLQGSNGGYAWEDEIKRSWDLVKVDDEGDMASLVASIVEARKKRTAKKNITPYQR
GIIRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRNGLAQ
LVSQVSGNPQDHIDALKSIRKQEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLS
TTDPGDIHQTIDSLVSEKIRVKVLGLSAQVAICKELCKATNYGDESFYKILLDETHLKEL
FNEAVTPLPVNKINKGFTLVKMGFPTRIFEDTPTFCSCHSKLVYGGYFCPNCHSKVCSLP
TVCPCCDLMLILSTHLARSYHHLMPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNHKNGK
LLTSSRYRCEDCKQEFCVDCDVFIHEILHNCPGCESKPVIT
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggctcctgtagttatttcagaatctgaagaggatgaggatagagttgccattactaga
agaactaagagacaagttcattttgatggcgagggagatgatcgtgtagaccaacagcaa
cagcagcacagttcaagccacagggatagggataaacatgtgcagcgtaagaagaagaaa
aggctctcgaatagaaacctgcaaggttcaaatggtgggtacgcttgggaggatgagatc
aagagaagttgggatttggtgaaagtggacgatgaaggggatatggcatctcttgtggct
agcatagtcgaggccagaaagaaacgtactgctaagaaaaacataacgccataccaaaga
ggtattatcagaagtttaatattaacactagattgtagtgaagctatgttggaaaaggat
ttgagaccaaacaggcatgccatgattatccagtacgccatagattttgtccatgaattt
ttcgaccaaaatccgatatctcaaatgggtattatcataatgagaaacggtttggcacaa
ctggtcagccaagttagcggaaacccgcaggatcacattgatgcgttgaaatccatcagg
aaacaagaaccgaaaggaaacccttcattgcaaaatgcattggaaatggcaagaggcctt
ttattgcctgttcctgcgcattgtacaagggaagtactgattgtatttggtagtctttcc
acaactgatcctggagatattcaccaaactatcgattcgttagtttctgagaaaattaga
gtgaaggttttggggttatcagctcaagtggccatatgtaaagaattatgcaaggcaacg
aattatggtgatgaatccttctataaaattttactcgatgaaactcacttaaaggagcta
tttaacgaggctgttacccctttacccgttaacaaaattaataagggtttcacactcgta
aagatggggtttccgacaaggatattcgaagatactccaactttttgttcgtgccattcc
aagttagtttacggcggatacttctgtcccaattgtcatagtaaagtttgttcattgccc
acagtctgtccatgttgtgacttgatgctaatcctttctacccacctggccagatcatat
caccatctgatgccgttaaaaacatttgcagaagtacctacaacagaaaaatttcgatca
gaagactgctttagttgccagtcaagatttcccatactgaaaaaccataaaaatggtaaa
ctactgacaagttctcgctatcgttgtgaagattgtaaacaagaattttgtgttgactgc
gatgtgttcatccatgaaatccttcataactgcccaggctgtgaatccaagcccgtaata
acttaa

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