Saccharomyces cerevisiae (budding yeast): YLR025W
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Entry
YLR025W CDS
T00005
Symbol
SNF7, DID1, RNS4, VPL5, VPS32
Name
(RefSeq) ESCRT-III subunit protein SNF7
KO
K12194
charged multivesicular body protein 4A/B
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03250
Viral life cycle - HIV-1
sce04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
YLR025W (SNF7)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
YLR025W (SNF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YLR025W (SNF7)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sce04147
]
YLR025W (SNF7)
Membrane trafficking [BR:
sce04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
YLR025W (SNF7)
Exosome [BR:
sce04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
YLR025W (SNF7)
Exosomal proteins of other body fluids (saliva and urine)
YLR025W (SNF7)
Exosomal proteins of colorectal cancer cells
YLR025W (SNF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
CHASE3
DUF4388
FAM194
Motif
Other DBs
NCBI-GeneID:
850712
NCBI-ProteinID:
NP_013125
SGD:
S000004015
UniProt:
P39929
Structure
PDB
LinkDB
All DBs
Position
XII:194452..195174
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AA seq
240 aa
AA seq
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MWSSLFGWTSSNAKNKESPTKAIVRLREHINLLSKKQSHLRTQITNQENEARIFLTKGNK
VMAKNALKKKKTIEQLLSKVEGTMESMEQQLFSIESANLNLETMRAMQEGAKAMKTIHSG
LDIDKVDETMDEIREQVELGDEISDAISRPLITGANEVDEDELDEELDMLAQENANQETS
KIVNNNVNAAPISENKVSLPSVPSNKIKQSENSVKDGEEEEDEEDEDEKALRELQAEMGL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcatcactttttggttggacatcaagtaatgccaagaataaagagtcaccaaca
aaggccatagtgcggttgagggagcatatcaaccttctatccaaaaagcaatcgcattta
cgtactcaaattacaaatcaagagaatgaagctagaatctttttgacgaagggcaataaa
gtaatggcgaagaatgcacttaaaaagaagaagacaatcgaacaacttttaagtaaggta
gaaggcacaatggagtctatggaacagcagctattctctatagaaagtgcaaacttaaat
ctagagacaatgagggctatgcaggaaggtgctaaggcaatgaaaactattcacagtggc
cttgacatagataaagtggatgaaactatggacgagataagggagcaagtcgaattagga
gatgaaataagcgacgctatatccaggcctttaattactggggcaaacgaggtggatgaa
gatgagctggacgaggaattggacatgctggctcaagaaaatgctaaccaagaaacgtcc
aagatcgttaataataatgttaatgcggcgcctatctcagagaacaaagtctcactacct
agtgttccaagtaataaaattaaacaaagtgagaactctgtgaaggacggggaagaggaa
gaggatgaagaagatgaagatgaaaaagcattaagagaactacaagcagaaatggggctt
tga
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