Saccharomyces cerevisiae (budding yeast): YLR086W
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Entry
YLR086W CDS
T00005
Symbol
SMC4
Name
(RefSeq) condensin subunit SMC4
KO
K06675
structural maintenance of chromosome 4
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
YLR086W (SMC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sce03036
]
YLR086W (SMC4)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
YLR086W (SMC4)
Condensin II
YLR086W (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
850775
NCBI-ProteinID:
NP_013187
SGD:
S000004076
UniProt:
Q12267
Structure
PDB
PDBj
LinkDB
All DBs
Position
XII:302243..306499
Genome browser
AA seq
1418 aa
AA seq
DB search
MSDSPLSKRQKRKSAQEPELSLDQGDAEEDSQVENRVNLSENTPEPDLPALEASYSKSYT
PRKLVLSSGENRYAFSQPTNSTTTSLHVPNLQPPKTSSRGRDHKSYSQSPPRSPGRSPTR
RLELLQLSPVKNSRVELQKIYDRHQSSSKQQSRLFINELVLENFKSYAGKQVVGPFHTSF
SAVVGPNGSGKSNVIDSMLFVFGFRANKMRQDRLSDLIHKSEAFPSLQSCSVAVHFQYVI
DESSGTSRIDEEKPGLIITRKAFKNNSSKYYINEKESSYTEVTKLLKNEGIDLDHKRFLI
LQGEVENIAQMKPKAEKESDDGLLEYLEDIIGTANYKPLIEERMGQIENLNEVCLEKENR
FEIVDREKNSLESGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKD
LEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNL
VSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSL
KDKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKI
LAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEAR
SSLSKAQNKSKVLTALSRLQKSGRINGFHGRLGDLGVIDDSFDVAISTACPRLDDVVVDT
VECAQHCIDYLRKNKLGYARFILLDRLRQFNLQPISTPENVPRLFDLVKPKNPKFSNAFY
SVLRDTLVAQNLKQANNVAYGKKRFRVVTVDGKLIDISGTMSGGGNHVAKGLMKLGTNQS
DKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEA
DSLASELTLAEQQVKEAEMAYVKAVSDKAQLNVVMKNLERLRGEYNDLQSETKTKKEKIK
GLQDEIMKIGGIKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSE
RDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESIN
EFKSIEIEMKNKLEKLNSLLTYIKSEITQQEKGLNELSIRDVTHTLGMLDDNKMDSVKED
VKNNQELDQEYRSCETQDESEIKDAETSCDNYHPMNIDETSDEVSRGIPRLSEDELRELD
VELIESKINELSYYVEETNVDIGVLEEYARRLAEFKRRKLDLNNAVQKRDEVKEQLGILK
KKRFDEFMAGFNIISMTLKEMYQMITMGGNAELELVDSLDPFSEGVTFSVMPPKKSWRNI
TNLSGGEKTLSSLALVFALHKYKPTPLYVMDEIDAALDFRNVSIVANYIKERTKNAQFIV
ISLRNNMFELAQQLVGVYKRDNRTKSTTIKNIDILNRT
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagtccattgagcaaaagacaaaagcggaagtccgcccaagaaccagaatta
tctcttgatcaaggtgatgccgaagaagattcgcaggtagaaaaccgagttaacctaagc
gagaatacaccagagccggatcttcctgcgttggaagcatcttattccaaatcttatact
cccagaaagcttgttttaagttctggggaaaatcggtatgccttttctcaacctacaaac
tcaacaaccacgtcattacatgtaccgaacttgcaaccaccaaaaacctcttctaggggt
cgcgaccataagtcctactctcaatcaccaccaaggtctccaggaagatcgccaactaga
agattagaattgctccagctttcgccagtgaaaaatagcagggttgaactacaaaaaatt
tatgataggcaccagtcgtcgagcaagcaacagagcagactatttattaacgaactagtc
ttagagaacttcaagtcctacgctggtaaacaagtagtaggaccctttcatactagcttc
tcggccgtggtaggccccaatggttcaggtaaatcaaatgtcatcgattccatgttattt
gtatttggatttagagcgaacaagatgagacaggacagattgtcggatttaattcataaa
tcagaagctttcccaagtttgcaatcatgttccgtagctgtacattttcagtacgttatt
gatgaatcttcgggtacttcccgaatcgatgaagaaaaacctggattgatcattacaagg
aaagcctttaaaaacaactcatcgaaatattacataaacgaaaaagaaagtagctacaca
gaggtgacaaagcttttaaagaatgagggtattgatttagaccataaacgatttttaatt
ctacaaggtgaagtagagaatattgctcaaatgaagcctaaagcagaaaaagagagtgac
gacggactactggaatatctggaggacataattggaactgcaaactataagccgttaatt
gaagagcgaatgggacagattgagaatctaaatgaagtttgcctggaaaaggaaaataga
tttgaaattgttgatagagaaaaaaactctttagagtcagggaaagaaacggcgttagag
tttttagagaaggaaaagcagctgacgcttttaagatcaaaattatttcaatttaaattg
ttgcaaagcaactctaaacttgccagcaccttggaaaagatctcctcttcgaataaagac
ctcgaagatgagaagatgaaatttcaagaatctttgaaaaaagtggatgagattaaagca
caacgtaaggaaataaaagatcgaatatcatcttgtagctcgaaagaaaagaccctggtt
ttagaaagaagagaattagaaggcaccagggtgtctctagaagagagaacaaaaaatttg
gtaagtaaaatggaaaaagcagaaaagactttgaaatccaccaaacattcaatatcggag
gccgagaatatgcttgaagagcttcgtggacaacaaaccgaacacgagacggagatcaaa
gacttgactcaattgctggaaaaggaacgaagtatacttgatgatattaaactatctttg
aaagataaaacgaagaatatatctgcagagattattcggcatgaaaaggaactggagcct
tgggacctccaacttcaggaaaaagaatcacagatacaattggctgaatccgaactatct
ttgttggaggaaactcaagctaaactgaaaaaaaacgttgaaactttagaagaaaaaatt
cttgccaagaaaacacacaagcaggagctacaagatcttatcctcgatctgaaaaagaag
ctgaactcacttaaagatgaaaggtcgcaaggtgaaaagaattttacttctgctcatcta
aagttaaaagaaatgcaaaaggttttgaacgcgcatcgccagcgtgcaatggaagctaga
tcctctttatcaaaagctcagaataaaagtaaggttttaacagctttatcgagactgcaa
aagtcaggacgtataaatggtttccatggacgtttgggcgatttgggcgttatcgacgat
agttttgacgttgctatttctactgcttgtccgagactagatgatgtcgtggttgatact
gtagaatgtgcgcaacactgcatcgactacttaagaaaaaacaaacttggttatgcaagg
tttattctcttggataggttacgccaattcaatttacaacctatcagtacaccagaaaat
gtaccgagactatttgatttagttaaacctaaaaacccaaaattctcaaatgcattttac
agtgttcttagagacactttggttgctcagaatttaaaacaagccaataatgtagcatat
gggaagaaaagatttagagttgtcactgtggatgggaaattaattgatatttctggtaca
atgagtggtggtggcaaccatgtagcaaaaggtctaatgaaattaggtacgaatcagtca
gacaaggttgatgattacacccccgaggaagtagataaaattgagcgtgagctatctgaa
agagaaaataacttccgcgtggcaagcgatacggtccacgagatggaggaagaactgaaa
aaattgagggaccacgaaccagacttggaatcacaaatatcaaaggcagaaatggaagct
gattccttggcgagtgaattgacactggcagaacaacaagtgaaagaggcagaaatggcg
tacgtcaaggcagttagtgacaaagcgcaactaaacgtggtgatgaagaatttggaacgc
ttgagaggcgaatacaatgatttgcaatccgaaacaaaaactaaaaaggaaaagatcaaa
ggcttgcaagacgaaatcatgaaaattggtggtatcaaattgcaaatgcaaaattcaaaa
gttgaatcagtttgtcagaaattggatattctagtggccaaacttaaaaaagtcaaatct
gcctcaaagaagtcaggaggagatgtcgtaaagtttcaaaaactgctccaaaactctgaa
agagacgtagaactatcatcagatgagttaaaagtcatcgaagaacaactaaaacataca
aaactggctttggcagaaaatgacacaaatatgaatgagacgctcaacttgaaagttgaa
ttaaaagaacagagcgaacaactgaaggaacaaatggaggacatggaggaaagcatcaat
gaatttaaatctatagaaatcgaaatgaagaacaagctggaaaaattgaactcactgttg
acgtacatcaaaagtgagataacgcagcaagaaaaaggattaaacgaactatcaattagg
gatgtaacccacaccctgggaatgttagacgataataaaatggactcagtgaaagaggat
gttaaaaacaatcaagaacttgatcaggaataccggtcctgtgaaactcaagatgagagt
gaaataaaagacgctgagacttcttgtgacaattatcatcctatgaacattgatgagact
tcagatgaggtatccagagggataccaagactttctgaggacgaattaagggagttggac
gtagaactgattgaaagtaaaataaatgaattgtcatattatgtcgaagagactaacgtg
gatattggagttttggaagagtacgctaggcgcttagcagagttcaaaagaaggaagctg
gatttaaataatgctgttcaaaaaagagatgaagttaaggaacaattaggaatacttaaa
aagaaaagatttgatgaatttatggctggctttaatatcatatcaatgaccctaaaagaa
atgtaccaaatgattactatgggtggaaatgctgaattagaacttgtggatagtctagat
cctttttctgaaggagttacgtttagtgttatgcctcctaaaaagagttggagaaatata
acaaacctttcaggtggtgagaaaacactaagctccttggctttggtttttgctttacat
aagtataaaccaacccccctttatgtcatggatgaaatagatgccgctctggatttcaga
aatgtctcaatcgtagctaactatatcaaagaaagaaccaagaatgcacagtttattgtt
atttcgctgagaaataacatgttcgaattagcacaacagttagttggtgtttataaaaga
gataatagaaccaaaagtaccacgattaaaaacatagatatcttaaacagaacttag
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