Saccharomyces cerevisiae (budding yeast): YLR135W
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Entry
YLR135W CDS
T00005
Symbol
SLX4
Name
(RefSeq) Slx4p
KO
K15079
structure-specific endonuclease subunit SLX4
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
YLR135W (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sce03400
]
YLR135W (SLX4)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
YLR135W (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
Adeno_100
Tfb2
MRP
PTPA
SPEF2_C
Motif
Other DBs
NCBI-GeneID:
850826
NCBI-ProteinID:
NP_013236
SGD:
S000004125
UniProt:
Q12098
Structure
PDB
PDBj
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All DBs
Position
XII:413281..415527
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AA seq
748 aa
AA seq
DB search
MELQRAQRNLKFLQNEDYVNVTDQTNLNGESQNAYSLGMETQVPEMQFSLSSDDDSIGTQ
VKSVTAQKSPMTQETTKNDTERNKDVDKSCNPVSTSHPDLGGSNIEENIFINTQIQSRLD
DAEEETNLKLKLEKFKYSFKSSNADDTHSNANVTAKRRPAIRKANSKLKTKPKTKRDPKI
IKNITDFNINNYERSRTASLLKQLSGKHKKVLDIIKTQNEGNSDKPPRARNNKGEKATFD
TYSEQEWKDIMKLLLQKFPQSEETDLNEVQKFLYGSEKSSNSLDNQESSQQRLWTASQLP
PELPDEAIQPEQEERIRDTQSAVNFLSLSQVMDDKSEIMKDEESIIISRGDSTSSQEYGN
GLEPQQPVGNVVGEDIELAVGTRINAFSLTDYKACKPMSVEVSRRCENSTDNDYDNISIV
SDTTDETSTLFPLDQYRYVFIENDERPPLATDTIGSTQFFTPNTSPLDGIIDLTQESFKA
VRSLISPLKVENNKTGVTSQASNQVQVPATRTPTIIPQKNLTTTLKTEEEKNNIGSSIRV
KLLQESVVKLNPKLVKHNFYRVEANDSEEEETEFDDQFCIADIQLVDSSKISTKDSTQNP
TTSNDIIDTSAASSIASPEKFCEIMMSQSMKELRQSLKTVGLKPMRTKVEIIQSLQTASQ
ILSTANPDNKGEHGGVANFSKIEIFDHLTELIEAFPDFLERIYTFEPIPLNELIEKLFSA
EPFVSQIDEMTIREWADVQGICLRNDKK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcagagggcacaacggaatttgaagtttttacaaaacgaggattatgtgaac
gttaccgatcaaactaacctgaatggagagagccagaatgcttactctttaggaatggaa
actcaagtaccggaaatgcagttttccttatcatctgatgatgattcaataggtacgcaa
gtaaaaagcgtaactgcacaaaaatcgcctatgacgcaagagactacgaaaaacgataca
gaaagaaataaagatgttgataaaagttgtaacccagtcagcacttcccatcccgattta
ggcggatcaaatatcgaggagaacatattcattaacactcaaattcaaagccgacttgat
gacgcagaggaagaaacaaatcttaagttaaaacttgaaaaattcaagtattcgttcaag
agtagtaacgcagatgatacccacagcaatgcaaatgtaacagctaaaagaagaccagca
ataaggaaggctaattcgaaactcaaaacaaaacctaaaactaaacgagaccctaaaatt
atcaaaaatataactgatttcaatattaataactacgaacgttcaaggactgccagctta
ttaaagcaattatcaggtaagcacaagaaggttttggacataataaagacgcaaaatgaa
ggaaacagtgataaacctcccagagcaaggaataacaagggtgaaaaagctacttttgat
acatatagtgaacaggagtggaaagatattatgaaacttcttctacaaaagtttccgcaa
agtgaggaaacggatttgaatgaagtccagaaatttttatatggaagcgaaaaaagctcg
aattctctagacaatcaagaatcctcacaacaaagactttggacagcatcacaattacca
cccgagcttcccgatgaggctattcaaccagagcaggaagaaaggatacgcgatacccaa
agtgcagtaaatttcttatcgttgtctcaagtaatggatgacaaaagtgaaattatgaaa
gacgaagaaagcataattatttcacggggagattctacaagctctcaagaatatggaaac
gggttagagccacaacaaccggtaggaaatgttgttggtgaagatattgaactggctgtg
ggaacacgtataaatgcattttcactgacagattataaagcttgcaaacctatgtctgtt
gaggtaagtagaagatgcgaaaacagtacggataatgattatgacaatatttctattgtc
tcagatactacagatgagacatccacattgtttccactagaccagtatcggtatgttttc
attgaaaatgatgaaagaccaccattagccaccgacacgataggcagcacacagtttttc
actccaaacacatcgcctttggatgggataatcgatttaacacaggaatcattcaaagct
gttcgatcgttaatatcacctttgaaagtagaaaacaacaaaacaggggtaacatcacaa
gcatcaaatcaggttcaggtaccagctacaagaacccctacaattattcctcaaaagaac
cttactacaactttaaaaactgaagaagaaaagaataacataggaagttccatcagagtt
aaattattgcaagaaagcgtagttaagctaaaccccaaactggtgaaacataacttttat
agagttgaggcaaatgattctgaagaagaggagacagaatttgatgaccaattctgcatt
gctgatatccaattggtagattcctccaaaatttcgactaaagattctacacaaaatcct
actactagcaacgacattattgatacctctgcagctagttccatagcttctcccgagaaa
ttttgtgagatcatgatgtcccaatcaatgaaagagcttcgacaaagcttgaaaacagtg
gggttgaaacctatgaggacgaaggttgaaatcattcaatccttacaaactgcatctcaa
attctgtccacagctaatccagataataaaggtgagcatggtggggtggcaaatttcagt
aagatagaaatatttgatcatttaaccgaactaattgaagccttccctgattttttggag
cgaatatatacctttgaacccattccgctaaatgagctaattgaaaagctgttcagcgcc
gagccatttgtttcgcaaatcgacgaaatgaccatcagagaatgggccgatgttcaagga
atatgtctgagaaacgataaaaagtag
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