Saccharomyces cerevisiae (budding yeast): YLR196W
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Entry
YLR196W CDS
T00005
Symbol
PWP1
Name
(RefSeq) rRNA-processing protein PWP1
KO
K14791
periodic tryptophan protein 1
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sce03009
]
YLR196W (PWP1)
Ribosome biogenesis [BR:
sce03009
]
Eukaryotic type
90S particles
Other 90S particles
YLR196W (PWP1)
Pre-60S particles
Other pre-60S particles
YLR196W (PWP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40
Beta-prop_EML
EIF3I
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_DCAF12
Pep3_Vps18
Beta-prop_LRRK2
SUKH_6
WD40_like
Beta-prop_Nup120_160
PQQ
SMI1_KNR4
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
850893
NCBI-ProteinID:
NP_013297
SGD:
S000004186
UniProt:
P21304
LinkDB
All DBs
Position
XII:543968..545698
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AA seq
576 aa
AA seq
DB search
MISATNWVPRGFSSEFPEKYVLDDEEVERINQLAQLNLDDAKATLEEAEGESGVEDDAAT
GSSNKLKDQLDIDDDLKEYNLEEYDDEEIADNEGGKDVSMFPGLSNDSDVKFHEGEKGED
PYISLPNQEDSQEEKQELQVYPSDNLVLAARTEDDVSYLDIYVYDDGAGFHSSDIPVEEG
DEADPDVARGLVRDPALYVHHDLMLPAFPLCVEWLDYKVGSNSEEAANYAAIGTFDPQIE
IWNLDCVDKAFPDMILGEPLDNSMVSLKSKKKKKKSKTGHITTHHTDAVLSMAHNKYFRS
VLASTSADHTVKLWDLNSGNAARSLASIHSNKNVSSSEWHMLNGSILLTGGYDSRVALTD
VRISDESQMSKYWSAMAGEEIETVTFASENIILCGTDSGNVYSFDIRNNENRKPVWTLKA
HDAGISTLCSNKFIPGMMSTGAMGEKTVKLWKFPLDDATNTKGPSMVLSRDFDVGNVLTS
SFAPDIEVAGTMVIGGVNKVLKLWDVFTNRSVRKSFKSELENVQARAKEEAQKIGKSSRI
ARKYTSNDNPDTVITIDDQGEDEEEREGGDEHDDMA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgctactaattgggttccaagagggttttcctcggaatttcctgaaaagtat
gttctggatgatgaggaagtggaaagaattaaccaattagcacagttgaatttggatgat
gctaaagctactttggaagaagcagaaggcgaatcaggtgttgaagatgacgccgcaaca
ggtagttctaataagttgaaggatcagttggatatagatgatgatttgaaagaatataac
ctggaagaatatgacgatgaggaaattgcagataatgagggtggtaaagacgtttccatg
ttcccgggtttaagtaatgatagcgatgttaaattccatgagggtgaaaaaggtgaagat
ccatatatttcattgcctaatcaagaggatagtcaagaggagaagcaggagttacaagtt
tacccatccgataatttagttcttgctgcgagaacagaagatgacgtttcgtatttggat
atctacgtttacgatgacggtgctgggttccacagtagcgatattcccgttgaagaaggt
gatgaagctgacccagatgttgctcgtggattggttcgtgaccctgcactttacgttcac
catgatttaatgttgcctgcttttccactatgtgttgagtggcttgactacaaggttgga
tccaattccgaagaagcagccaattatgctgccattggtacgtttgatccacaaattgaa
atttggaacttggactgtgttgacaaggcctttcccgatatgattctgggtgaacctctt
gataattcaatggtgtctttgaaaagcaaaaagaagaagaagaagtctaagactggacac
attactactcatcataccgatgctgttttatccatggcacacaacaaatatttccgttcc
gttttagcatccacctctgcagatcataccgtaaaactatgggatttgaactcaggtaac
gcagcccgctccttagcttccattcattcaaacaaaaatgtttcatcatctgaatggcac
atgttgaatggttccattcttttgaccggtggttatgattctcgagtagctttaacagat
gttagaatttctgacgaaagtcaaatgagtaaatactggtctgccatggcaggtgaggaa
atagaaactgttacatttgccagtgaaaatataatattatgtggtactgattctggtaat
gtgtattctttcgatattagaaacaatgaaaaccgtaaaccagtttggacattgaaggca
cacgatgctggtatctccacattatgttcaaacaaattcatccctggtatgatgagtaca
ggggccatgggtgaaaagactgtcaaattatggaaattccccttggatgatgctacgaac
actaagggcccaagcatggttctgtctcgtgatttcgatgtcggaaatgtattgacatcg
tcattcgctccagacatcgaggtagcgggtaccatggtcattggtggtgtcaataaagtt
ttgaaactatgggacgtttttaccaatagatctgtacgtaagagctttaaaagtgaacta
gagaatgttcaagcaagagcaaaagaagaagcccaaaaaataggaaaaagttcaagaatc
gccagaaaatacaccagtaacgataacccagatactgttataaccattgatgatcaaggt
gaagatgaagaagaaagagaaggtggagatgagcatgatgacatggcataa
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