Saccharomyces cerevisiae (budding yeast): YLR222C
Help
Entry
YLR222C CDS
T00005
Symbol
UTP13
Name
(RefSeq) Utp13p
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YLR222C (UTP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sce03009
]
YLR222C (UTP13)
Ribosome biogenesis [BR:
sce03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
YLR222C (UTP13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_Prp19
Utp13
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
ASA1
Beta-prop_WDR41
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_DCAF4
CFAP251_N
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_NOL10_N
Beta-prop_Nup120_160
Beta-prop_SPT8
WD40_like
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Tricorn_2nd
Ge1_WD40
TRM82_WD
Beta-prop_Aladin
Beta-prop_WDR11_2nd
DUF8238
Motif
Other DBs
NCBI-GeneID:
850919
NCBI-ProteinID:
NP_013323
SGD:
S000004212
UniProt:
Q05946
Structure
PDB
PDBj
LinkDB
All DBs
Position
XII:complement(579318..581771)
Genome browser
AA seq
817 aa
AA seq
DB search
MDLKTSYKGISLNPIYAGSSAVATVSENGKILATPVLDEINIIDLTPGSRKILHKISNED
EQEITALKLTPDGQYLTYVSQAQLLKIFHLKTGKVVRSMKISSPSYILDADSTSTLLAVG
GTDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWDLVKR
KCLHTLQEHTSAVRGLDIIEVPDNDEPSLNLLSGGRDDIINLWDFNMKKKCKLLKTLPVN
QQVESCGFLKDGDGKRIIYTAGGDAIFQLIDSESGSVLKRTNKPIEELFIIGVLPILSNS
QMFLVLSDQTLQLINVEEDLKNDEDTIQVTSSIAGNHGIIADMRYVGPELNKLALATNSP
SLRIIPVPDLSGPEASLPLDVEIYEGHEDLLNSLDATEDGLWIATASKDNTAIVWRYNEN
SCKFDIYAKYIGHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQII
KVSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVS
FCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIK
IWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQFWKDCTEQEIEEEQEKAK
LQVEQEQSLQNYMSKGDWTNAFLLAMTLDHPMRLFNVLKRALGESRSRQDTEEGKIEVIF
NEELDQAISILNDEQLILLMKRCRDWNTNAKTHTIAQRTIRCILMHHNIAKLSEIPGMVK
IVDAIIPYTQRHFTRVDNLVEQSYILDYALVEMDKLF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaaacctcatataaaggtatatcgttaaaccctatttatgcaggaagcagt
gctgttgccactgtttcagaaaatggtaaaatactagctactccggtgcttgacgaaatc
aacataatcgatttaaccccaggctccagaaaaattttgcacaagatttctaatgaagac
gagcaagaaattactgcactgaaattaactcctgatggtcaatatctcacgtatgtttca
caagctcagcttttaaaaatctttcaccttaagaccgggaaagttgtcagatcaatgaaa
atctcttctccatcgtacattctcgacgcagattccacttcaacgcttctcgcagtcgga
gggacagatggtagtataattgttgtggatattgaaaatggttacattactcattcgttc
aaaggtcatggtggtacaatttccagtttgaagttttatggacaattgaatagtaaaata
tggttattagcatccggtgacaccaatggtatggtaaaggtttgggatcttgttaaaagg
aagtgcttgcacacattacaagagcacacatctgctgtgagagggttggatatcattgag
gtaccagataatgatgagccaagcctaaatttactttccggtggtagagacgatatcatc
aatctctgggatttcaatatgaaaaagaaatgtaaattgttgaaaacacttccagtaaat
caacaggtagagtcatgcggattcctaaaggatggtgacggtaaacgcataatttataca
gccggcggtgatgctatctttcagttaattgactctgaatctggtagcgtgcttaaaaga
accaataaacctatagaagagttattcattattggtgtacttccaatattgagcaattca
cagatgtttttagtattgtctgaccagacattacaactaattaacgttgaagaagactta
aagaatgatgaagacacaatacaggtcacttcgagcattgctggtaatcatggtattatt
gctgacatgaggtatgttggcccagagctgaataaattagctttagctaccaattctcca
tcgcttaggataatacccgtccccgatttatcaggcccagaagcttcgctgcctttggat
gtcgaaatttatgaaggtcatgaagatttgctaaattcattggatgctactgaggatggc
ctgtggatcgcaaccgcctctaaagataatacggctattgtttggagatacaatgagaac
agctgcaagtttgatatttatgccaagtatattggtcattcagctgccgtaactgctgtt
ggattgccaaatatagtttcaaagggatatcctgaatttttattgacagcatcgaatgat
ttaacaattaagaaatggataattccaaagccaactgctagtatggatgttcaaatcatc
aaggtatccgaatatactcgtcatgcccatgaaaaggatatcaatgctttgtcagtttct
cctaacgattctatttttgcaacagcatcatacgacaagacctgtaagatctggaaccta
gaaaatggtgaattggaagccacgttggccaaccacaagcgtggactatgggatgtatca
ttttgccaatatgataaattattggcaacttcttcaggtgataaaacagtcaagatatgg
tcattggatacattcagcgttatgaaaacattggaaggtcataccaatgcggttcaaaga
tgttcgtttattaataagcaaaaacaactgatcagttgtggtgctgatggcttgatcaaa
atatgggattgttctagcggtgaatgtctgaagactttggatggtcataataatagatta
tgggctttaagtactatgaatgatggtgatatgatcgtaagtgctgatgcagatggtgtt
tttcagttttggaaagattgtacggaacaagaaatagaagaagaacaagaaaaagctaaa
ttacaagtcgaacaagaacaatcgcttcaaaattatatgagcaaaggtgattggacaaat
gcatttttgttagcaatgactttagatcacccaatgaggttgtttaatgttttgaaaaga
gctttgggcgaatcaaggtctagacaagataccgaagagggcaaaattgaagtcattttc
aatgaagaattggaccaagccatctctatcctaaatgatgaacagttaattttgttaatg
aaacgatgcagagattggaatacaaatgcaaaaacacataccatagcgcaaagaacaata
agatgtattttgatgcatcataacatagcaaaattgagtgagatacccggaatggtaaag
atagttgatgcaataattccatacacgcaaaggcatttcacaagggttgataacttagtt
gaacaaagttacatattagactacgcgctagtggaaatggataagctattctag
DBGET
integrated database retrieval system
