Saccharomyces cerevisiae (budding yeast): YLR409C
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Entry
YLR409C CDS
T00005
Symbol
UTP21
Name
(RefSeq) rRNA-processing protein UTP21
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YLR409C (UTP21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sce03009
]
YLR409C (UTP21)
Ribosome biogenesis [BR:
sce03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
YLR409C (UTP21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_HPS5
eIF2A
WDR90_beta-prop_4th
Beta-prop_LRRK2
Beta-prop_VPS8
WDR54
PQQ_2
Beta-prop_RIG_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
851125
NCBI-ProteinID:
NP_013513
SGD:
S000004401
UniProt:
Q06078
Structure
PDB
PDBj
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All DBs
Position
XII:complement(934414..937233)
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AA seq
939 aa
AA seq
DB search
MSIDLKKRKVEEDVRSRGKNSKIFSPFRIIGNVSNGVPFATGTLGSTFYIVTCVGKTFQI
YDANTLHLLFVSEKETPSSIVALSAHFHYVYAAYENKVGIYKRGIEEHLLELETDANVEH
LCIFGDYLCASTDDNSIFIYKKSDPQDKYPSEFYTKLTVTEIQGGEIVSLQHLATYLNKL
TVVTKSNVLLFNVRTGKLVFTSNEFPDQITTAEPAPVLDIIALGTVTGEVIMFNMRKGKR
IRTIKIPQSRISSLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQ
ATFLNGQPIIVTSGGDNSLKEYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSYIAFAD
SQSHFMLSASKDRSLWSFSLRKDAQSQEMSQRLHKKQDGGRVGGSTIKSKFPEIVALAIE
NARIGEWENIITAHKDEKFARTWDMRNKRVGRWTFDTTDDGFVKSVAMSQCGNFGFIGSS
NGSITIYNMQSGILRKKYKLHKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKSTLLGKL
KLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRWI
VSASLDSTIRTWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTGNGICIWTNRAQF
KTVSTRTIDESEFARMALPSTSVRGNDSMLSGALESNGGEDLNDIDFNTYTSLEQIDKEL
LTLSIGPRSKMNTLLHLDVIRKRSKPKEAPKKSEKLPFFLQLSGEKVGDEASVREGIAHE
TPEEIHRRDQEAQKKLDAEEQMNKFKVTGRLGFESHFTKQLREGSQSKDYSSLLATLINF
SPAAVDLEIRSLNSFEPFDEIVWFIDALTQGLKSNKNFELYETFMSLLFKAHGDVIHANN
KNQDIASALQNWEDVHKKEDRLDDLVKFCMGVAAFVTTA
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgacttgaaaaaaagaaaagtcgaagaagacgtaagaagtagagggaaaaat
tctaagatattttcccctttccggattattggtaatgttagcaatggtgttccttttgct
actggtacattgggatctaccttttacattgtaacgtgtgttggtaaaacatttcagata
tatgatgcgaataccttacatttactttttgtttccgagaaagaaacaccatcctcaatt
gtagcattatcagcacactttcactacgtctacgcagcatatgaaaacaaggttggtatt
tacaagaggggtattgaggaacatttgcttgagctagaaactgatgcaaatgtcgaacat
ttgtgcatattcggagattatctttgcgcttccaccgacgacaattccatctttatatac
aagaagtccgatccgcaagataaatatccatcagaattctacactaaacttaccgttact
gaaattcaaggtggcgaaattgtgtctttacaacatttggcaacttatttgaataaatta
actgtcgttaccaaatctaacgttttactttttaacgtcagaaccgggaagcttgtattc
acatcaaacgaatttccagaccaaatcacaactgctgaacccgctccagtcctggatatt
attgctctaggtaccgtgaccggtgaggttattatgtttaatatgagaaaaggtaaaagg
atccgcacaattaagattccgcaatcaagaatctcctcattgagtttcagaaccgacggt
tcttctcatttgagtgtgggaacgagcagtggtgatctaatattttatgatttagatcgc
cgttcaagaatacacgttttgaagaacattcatagagaatcgtacggtggtgtcactcag
gctacttttttaaatggtcaacccattattgttacatcaggtggtgacaattccctgaag
gagtacgttttcgatccgtcattatctcaaggaagcggtgatgtagttgttcaaccgcca
agatatctacgttccagagggggtcattctcaaccaccttcatacattgcgtttgctgat
tcgcaatcacacttcatgctatcagcatccaaagatagatcattatggagcttttctctg
cgtaaagatgcacagtcgcaagaaatgtcacaaaggttacacaagaaacaagatggcggc
agggtaggtggtagtacaattaagtctaaatttcctgaaatagtggctcttgcaattgaa
aatgccagaataggtgaatgggaaaacattatcactgcacataaagatgaaaagtttgca
agaacctgggatatgcgaaataaaagagttggcaggtggacttttgatactactgatgat
ggatttgttaaatctgtggccatgtcgcaatgtggtaattttggattcatcggttcttct
aacggctctatcaccatctataatatgcaaagtggtatactccgtaaaaaatacaaattg
cacaaaagagcagtcaccggtatatccttagatggtatgaatcgtaaaatggtttcttgt
ggactagacggtattgttggtttttatgactttaacaagtcaaccttgttgggaaaattg
aaattggatgcacctattaccgcaatggtttatcatcgttcttccgatctatttgcattg
gctttagacgacttatcaattgttgttattgacgcagttactcaaagagttgttcgtcaa
ttatggggtcatagtaatagaataactgcatttgatttctcacctgagggccgttggatt
gtttccgcttctctagattccaccattagaacgtgggatcttccaaccggaggatgtatc
gatggtatcatagtagataatgtcgctacgaatgtaaagttttctccgaatggtgacttg
cttgccactacccatgttactggtaatggtatatgcatctggacgaacagagcacaattt
aagacagtatcgacaagaaccatcgatgagtctgaatttgcaagaatggcgttacctagc
acatctgttcgagggaacgactcgatgttatcaggggctttagaaagcaatggaggagaa
gacctaaatgatattgatttcaacacttatacatcattggaacagattgataaggagctg
ttgactttatcaataggacctagaagtaaaatgaacacattgcttcatttagatgttatc
agaaaacgttctaagccaaaggaagctccaaagaaatcagaaaagcttccatttttcttg
caactatctggggaaaaggttggggatgaagcctctgtcagagaaggcatagcacatgaa
acaccagaagaaatccatcgcagagatcaagaagcacaaaagaagttagatgcagaagag
caaatgaataaattcaaagttacaggaagattagggtttgaatcacatttcacaaagcaa
ttacgagagggctcacaatccaaggactattcatcattgctggccactctaataaatttc
tcacctgctgcagtggatttggagataagatcattgaattcctttgagccatttgatgaa
attgtgtggtttatcgacgcgttaacacaggggttgaagagcaataaaaatttcgaactt
tatgaaacgtttatgagcttactgtttaaggcacacggtgatgttattcatgctaacaac
aagaatcaagatattgcctctgctcttcaaaattgggaggatgtacataagaaggaagac
agattagatgatcttgtgaagttttgcatgggagtggcagcttttgtgaccaccgcgtga
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