Saccharomyces cerevisiae (budding yeast): YLR417W
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Entry
YLR417W CDS
T00005
Symbol
VPS36, GRD12, VAC3, VPL11
Name
(RefSeq) ESCRT-II subunit protein VPS36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
YLR417W (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YLR417W (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sce04147
]
YLR417W (VPS36)
Membrane trafficking [BR:
sce04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
YLR417W (VPS36)
Exosome [BR:
sce04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
YLR417W (VPS36)
Exosomal proteins of colorectal cancer cells
YLR417W (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps36_ESCRT-II
EAP30
Vps36-NZF-N
zf-Sec23_Sec24
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
851135
NCBI-ProteinID:
NP_013521
SGD:
S000004409
UniProt:
Q06696
Structure
PDB
PDBj
LinkDB
All DBs
Position
XII:955010..956710
Genome browser
AA seq
566 aa
AA seq
DB search
MEYWHYVETTSSGQPLLREGEKDIFIDQSVGLYHGKSKILQRQRGRIFLTSQRIIYIDDA
KPTQNSLGLELDDLAYVNYSSGFLTRSPRLILFFKDPSSKDELGKSAETASADVVSTWVC
PICMVSNETQGEFTKDTLPTPICINCGVPADYELTKSSINCSNAIDPNANPQNQFGVNSE
NICPACTFANHPQIGNCEICGHRLPNASKVRSKLNRLNFHDSRVHIELEKNSLARNKSSH
SALSSSSSTGSSTEFVQLSFRKSDGVLFSQATERALENILTEKNKHIFNQNVVSVNGVDM
RKGASSHEYNNEVPFIETKLSRIGISSLEKSRENQLLNNDILFNNALTDLNKLMSLATSI
ERLYKNSNITMKTKTLNLQDESTVNEPKTRRPLLILDREKFLNKELFLDEIAREIYEFTL
SEFKDLNSDTNYMIITLVDLYAMYNKSMRIGTGLISPMEMREACERFEHLGLNELKLVKV
NKRILCVTSEKFDVVKEKLVDLIGDNPGSDLLRLTQILSSNNSKSNWTLGILMEVLQNCV
DEGDLLIDKQLSGIYYYKNSYWPSHI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggagtactggcattatgtggaaactacgtcatcgggccaacctcttcttcgagaaggt
gaaaaagatatctttatcgatcagtccgtaggtctttaccatggcaaatctaagattcta
cagcgacagaggggcagaatctttttaacgtcacaaagaattatctacatcgacgatgca
aagcccactcagaactcgcttgggttggaattggacgatctagcgtatgtaaactattca
tctggcttcttgaccagatcacctcgtctgatcctgtttttcaaggacccctccagtaag
gatgaacttggtaaaagtgcggaaacagcaagtgccgacgttgtttcgacgtgggtctgc
cccatctgtatggtttcgaacgaaacgcagggggaattcactaaagacactctacctaca
cccatttgtatcaattgcggtgtgccagcggactatgagctcaccaagtcgtctataaat
tgttctaatgcaatcgacccgaacgccaacccacagaatcagttcggagtgaactctgag
aacatttgccccgcctgtacttttgctaatcatcctcaaataggaaattgcgagatttgc
ggccacagattgcctaatgcatccaaagtacgatcaaagctgaacaggctaaactttcat
gattctagggtccatattgagctagaaaaaaattcactggctagaaacaagagctcgcac
tcggcattatcgtcctcgtcctcgacaggatcatcgacagaattcgtgcaattgagtttc
cgcaaatctgatggcgtattgttttcacaagctacagagagggctttggagaatatactc
actgaaaagaataagcatattttcaatcagaatgtggtttctgtaaatggtgtagacatg
aggaaaggggctagttctcacgaatacaacaatgaggtgccatttattgagactaaattg
agcagaattggcatatcaagcttggaaaaatctagagaaaaccagcttttgaacaatgac
attctctttaacaatgcgttgaccgacctaaacaagctaatgtcgctggctaccagcatc
gaaagactatacaaaaatagcaacataacgatgaaaaccaagacattgaacttacaggat
gaatcaaccgtgaatgaaccgaaaacgagaagaccgctattgatacttgatagagagaag
ttcctaaataaagagctgttcttggatgagattgcgagagaaatttacgagttcacgttg
tccgagtttaaagatttgaacagtgataccaactatatgatcataactctggtagatcta
tatgcaatgtacaacaaatctatgcgtataggtacaggcctgatatctcccatggaaatg
agagaagcatgcgaaagattcgagcatttaggtctaaatgaattgaagttagtgaaagtt
aacaaaagaatattatgtgtaacgagcgaaaaattcgacgttgtaaaagaaaagctagta
gatctgatcggtgataatcctggttctgatctcctaagattgacacagattttgagttcc
aataattcaaaatcaaactggacgctaggtatccttatggaggtattacaaaattgtgtc
gatgaaggcgatttactgatagacaagcaactgagtgggatttactactataaaaactct
tattggccctcgcatatataa
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