Saccharomyces cerevisiae (budding yeast): YML001W
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Entry
YML001W CDS
T00005
Symbol
YPT7, AST4, VAM4
Name
(RefSeq) Rab family GTPase YPT7
KO
K07897
Ras-related protein Rab-7A
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04138
Autophagy - yeast
sce04144
Endocytosis
sce04145
Phagosome
sce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
YML001W (YPT7)
04145 Phagosome
YML001W (YPT7)
04138 Autophagy - yeast
YML001W (YPT7)
04148 Efferocytosis
YML001W (YPT7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YML001W (YPT7)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sce04147
]
YML001W (YPT7)
04031 GTP-binding proteins [BR:
sce04031
]
YML001W (YPT7)
Membrane trafficking [BR:
sce04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
YML001W (YPT7)
Exosome [BR:
sce04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
YML001W (YPT7)
Exosomal proteins of other body fluids (saliva and urine)
YML001W (YPT7)
Exosomal proteins of colorectal cancer cells
YML001W (YPT7)
Exosomal proteins of bladder cancer cells
YML001W (YPT7)
GTP-binding proteins [BR:
sce04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
YML001W (YPT7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SRPRB
ATP_bind_1
cobW
nSTAND3
NTPase_1
PduV-EutP
AAA_16
AAA_22
NACHT
AAA_7
AAA_24
TniB
AAA_33
NB-ARC
Motif
Other DBs
NCBI-GeneID:
855012
NCBI-ProteinID:
NP_013713
SGD:
S000004460
UniProt:
P32939
Structure
PDB
PDBj
LinkDB
All DBs
Position
XIII:267174..267800
Genome browser
AA seq
208 aa
AA seq
DB search
MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM
QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP
FVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQN
QADTEAFEDDYNDAINIRLDGENNSCSC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctagaaaaaaaaatattttgaaagtaatcatcctaggtgactctggtgttggg
aagacctccttgatgcaccgttatgtcaatgataagtattctcaacagtataaagcaaca
attggggctgactttttaacaaaagaggtgacagttgacggtgataaagttgccaccatg
caagtttgggatactgctggacaggaacgtttccaatcactgggtgttgctttctataga
ggtgcagattgttgcgttttggtctacgatgtgaccaatgccagttcctttgagaatatt
aagtcttggcgagatgaatttctagtgcatgcgaacgtaaactcaccagaaacatttcca
tttgttatactgggaaataaaattgatgccgaagaatctaaaaaaattgtatcagaaaag
tccgctcaggagcttgctaaatcattaggcgatattcctttgtttttaacaagtgccaaa
aacgccataaacgttgataccgcatttgaagaaattgcaaggagtgctttacaacagaat
caagctgatacagaagcctttgaagatgactataatgatgccatcaatattcgcctagat
ggagaaaataattcttgtagctgttga
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