Saccharomyces cerevisiae (budding yeast): YML049C
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Entry
YML049C CDS
T00005
Symbol
RSE1
Name
(RefSeq) U2 snRNP complex subunit RSE1
KO
K12830
splicing factor 3B subunit 3
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YML049C (RSE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YML049C (RSE1)
03041 Spliceosome [BR:
sce03041
]
YML049C (RSE1)
03036 Chromosome and associated proteins [BR:
sce03036
]
YML049C (RSE1)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
YML049C (RSE1)
Spliceosome [BR:
sce03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
YML049C (RSE1)
Complex B
YML049C (RSE1)
Complex C
U2 SnRNP specific factors
YML049C (RSE1)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
YML049C (RSE1)
TFTC complex
YML049C (RSE1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
854956
NCBI-ProteinID:
NP_013663
SGD:
S000004513
UniProt:
Q04693
Structure
PDB
PDBj
LinkDB
All DBs
Position
XIII:complement(174220..178305)
Genome browser
AA seq
1361 aa
AA seq
DB search
MWGGGKMAVVSLSPHTAKMRKLFGQASTTMAYDGLKREAERRTRSDHNITMVAKDDELYL
YHLTLKKQTNFVHSCIGHFVDLEAGSKREQSQLCVATETHLELYDTADGELKLIAKFQNL
FATITSMKSLDLPHSGSRAKASNWPTFLALTSDSGNLSIVQIIMHAGALRLKTLVNQPLT
RTTLRRVSPISYMEIDPNGRCIILSSVEQNKLCFLVDYAQKLRISSPLEIIRPHMVTLDM
AVVDVNFNNPCFVTLEIDNAATQLSVHLIFYVLELGLNHIVKKADYLVNPSANFVLSLPD
LSRYNITTSLSDNNYDADYDTLFNPFVVIGFENHILVKDMNGFFSLKVEIPKRSITNSRH
KNVTIISGIVQKLKNDFFVLLQSNHGDLFKLTVSPDTNDRNRPLVQLSYFDTIQNSHQLH
IFKNGYLFALSEMNNNFLFQFEKLGVEKNDFSNVLTSKDPNKSLVFEPSIKLQNLSILSQ
QLNLNPSIKSQIVSDSPLSIATKHFTNNKIITLTNAVNYSNLISTSLPPNATKLWLIPDP
ATTGDNNTLLFITFPKKTMILQIDNESMEELTPDEATRSAFKLSQDTTIHTCLMGSHSII
QVCTAELRHIVPTGKSRYSNKLTWVPPAGIRIVCATSSKTQLIISLSNYELVYFKIDVSS
DSLIELTTHPELDTMPSKVAIVQDTQHADLLAIADNEGMIKIMSLKDQKEDFLTVISLQL
VSEKISDMIMVRDSSIGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYL
REISVSLNNEEEEEEEEDDDDEKEEEEINSSGAKWMSCVVCHSSSTWVSYTWKNVWTIRQ
LKDQNMLSCSKFVNADVAINGVCSISSSGRLNIGRVSNFPTLDNWFHVHESSVNKQENGG
GDESNEEEEDEMEEEMEMLQISTFRPRTILSFPNNPKSILFIDNHSGKKQCRISLQIDGE
CLKFGSSDHLYKILDDIDCVSAAIIDFTRQADHLIICAGDKRLLTYKILVNKDKLSFDIE
LLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTPVSITKIVSMHQW
NYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGNAWT
LRSPPECEKIMSNHDPSELSNGAIKYPLDVITLQQKLPNTYDCKFKFQLLNHFFVNDIIT
DFHILDSLSNSDRPGCIYMGLQGTVGCFIPLLSKGNVFMMGNIENIMAEADDTFYLDYES
RKKNNNMRKEDDEEESGSVVLQGRHGIEDEIICEGSCSILGRDHQEYRSYYAPVRKVIDG
DLCENFLRLSLNEQEFLAKNLKSVQVEDIIQTINEVRTNYM
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtggggaggtggcaaaatggcagtagtaagcttgtcgccccacacggcgaagatgcgt
aaactatttgggcaagctagcacaacgatggcttatgacggtttaaaacgagaggctgaa
agaagaacaaggagtgaccataacataacaatggttgctaaagatgatgagctatacttg
taccatcttactttaaagaaacagacgaatttcgtgcactcctgcatcggacacttcgtc
gatctggaagcagggtccaagcgtgagcagtcgcaattgtgcgtagctactgagacgcat
ttagaactttatgatactgcagatggggaactaaagcttattgccaagtttcaaaacctg
tttgcgacgataacctcgatgaagtcgctggatctgccgcattcagggtcaagggcaaaa
gcttccaactggcccacttttctagcgctaacttccgattctggtaacctaagtatcgtg
caaatcattatgcatgcaggtgctcttagacttaagactttagtgaaccagccattgacg
aggaccacccttcgaagagtctctcccatatcatacatggaaattgaccctaatgggcgt
tgtatcattctctcatctgtcgaacaaaataaattgtgtttcctcgttgattatgctcaa
aaattgaggatttcgtctccattggaaatcatcagaccccatatggtaacgctggatatg
gcagttgttgatgtaaatttcaataatccatgttttgttaccttagaaatcgacaatgcc
gctactcaactatcagtacacttgatattttatgtcctcgagttgggtttgaatcacatc
gtcaagaaggcagattatttagttaacccatctgccaatttcgtactgagtttgccagat
ctatcgcgatataatataacaacttcgctaagcgacaacaactatgatgctgactatgat
acccttttcaacccttttgttgtcataggcttcgaaaatcatattctggtaaaggatatg
aacggatttttcagcctgaaagtggaaatacccaaaagatctatcacaaatagccgtcat
aaaaatgtaacaatcatatcaggcatagtgcagaaattgaaaaatgattttttcgtactt
ttacaatctaaccatggcgatctttttaagttaactgtaagtccagacactaatgataga
aatagacctttagttcaattgtcctactttgatacaatccaaaattcacaccaattacac
attttcaaaaacggttatctttttgcactatctgaaatgaataacaactttcttttccag
tttgagaaacttggtgtagagaaaaatgatttttctaatgttttaacctcaaaagatcca
aataagtcgctagttttcgaaccatccataaagttgcagaatttgagcatattatcgcaa
caattgaatttgaacccttcaataaaatctcaaattgtcagtgattcgccactgtctatc
gccactaaacattttacaaacaacaagataataactttaacaaatgctgtgaattactct
aatttgatatctactagtttacccccgaacgcaaccaagttatggctaatacccgatcct
gcaacaaccggcgataacaatactcttttgttcataacttttcccaagaaaactatgata
ctacaaattgacaacgagtccatggaggaactaacaccggatgaagcaacgcgttcagct
ttcaagctctctcaggacacaacaattcatacatgcctaatgggctcacactctattatc
caagtatgcaccgcagaactaagacatatcgtaccgactggtaaatctaggtattctaat
aagctgacttgggtgccaccagcgggaattcgtattgtatgtgccacgtcctcgaaaaca
caactaattatatcattatcaaattacgaattggtttatttcaagatagatgtatcttcg
gattcgttaatcgaattaaccacccacccagaattggacacaatgccctctaaagttgcg
attgtgcaagatacgcagcatgctgatttattagccattgctgacaatgagggtatgatc
aaaataatgtctcttaaagaccaaaaggaagattttttaactgtaataagtttgcaatta
gttagtgaaaagatttctgacatgataatggttagagattcctcaataggacagcttaat
ttgcatgtaggtttagaaaatggcgtttacatgaaatttcatataggggatgttgacgga
tcgttcactgacataaaaaggcgattccttggcttgaagcctgtttccctttcgtatttg
cgtgagatatctgtatcactaaataatgaggaagaagaagaagaagaagaagacgatgat
gatgaaaaagaagaagaagaaataaatagtagtggagctaaatggatgtcatgcgtggtt
tgccattcctcttctacatgggtaagctacacgtggaaaaatgtgtggaccatacggcag
ttaaaggatcaaaacatgctaagttgttccaaatttgttaacgcagatgttgcaatcaac
ggtgtttgttcaatatcgagctcaggacgcttaaatattggcagagtttccaactttcca
actttggataactggtttcacgttcatgaatcaagtgttaacaagcaagagaacggtgga
ggagatgaaagcaatgaagaggaagaagatgaaatggaagaagaaatggaaatgttacaa
atatctacattccgacctcgtactattttatcatttcccaataatccgaaaagcattttg
tttattgataatcacagtggtaagaaacaatgccgtatatcactgcaaattgatggtgaa
tgcttaaagtttggcagttcggatcatttatacaagatactggacgatatcgattgcgtt
tccgctgctataatagatttcacaagacaagctgatcatttgatcatttgtgctggcgac
aaaaggctgttaacatacaagatattagttaacaaagataaactatcttttgatattgaa
ttacttcaccaaacagaaatcatttcaccaatacatgctatgttgaagtttaaaaacttc
ttgctgacagccatgggctccactattgtcctttatggtttggggaaaaagcaattatta
agaaggtccgtaacacagaccccggtatccataacaaaaattgtgtctatgcaccagtgg
aattatgaaagactggccgttggtgatatacatgaatctgtcactttatttatctgggat
cctgcggggaatgtatttattccgtacgtagatgactctgtaaaacgccatgtgacggta
ttgaaatttctagatgaggcaactgttataggcgctgatagatatggaaatgcgtggact
ttaaggtctccaccagagtgcgaaaaaatcatgtcaaatcatgatcccagcgaattatct
aatggggccatcaagtacccactagacgtcatcactttacagcagaaattacccaatact
tatgattgcaagttcaagtttcaactactgaaccacttctttgttaatgatatcatcact
gatttccatatcctggacagcctttcaaattctgatagacctggttgtatctatatgggc
ttacaaggaaccgtgggatgctttatccccttattatccaaggggaatgtttttatgatg
ggaaacattgagaatataatggctgaggcggatgatacgttttatttagattatgaatca
agaaagaagaataacaatatgcgtaaggaagacgatgaagaggaatctggaagtgttgtg
ttacaaggacggcatggtatagaggatgaaataatatgtgagggttcctgttccatttta
ggtagagaccaccaagaatacagaagctattatgcccctgtacgtaaagttattgatggt
gatttatgtgaaaatttcctgagactttccttgaatgagcaggaatttttggccaaaaat
ttaaagagtgtacaagtggaggatataattcaaacaatcaacgaagtcagaacaaattac
atgtaa
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integrated database retrieval system
