Saccharomyces cerevisiae (budding yeast): YML103C
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Entry
YML103C CDS
T00005
Symbol
NUP188
Name
(RefSeq) Nup188p
KO
K14311
nuclear pore complex protein Nup188
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
YML103C (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YML103C (NUP188)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
YML103C (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188
Nup188_C
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
854868
NCBI-ProteinID:
NP_013604
SGD:
S000004571
UniProt:
P52593
Structure
PDB
LinkDB
All DBs
Position
XIII:complement(62582..67549)
Genome browser
AA seq
1655 aa
AA seq
DB search
MATPSFGNSSPQLTFTHVANFMNDAAADVSAVDAKQLAQIRQFLKANKTNLIESLNTIRQ
NVTSSGDHNKLRSTIANLLQINVDNDPFFAQSEDLSHAVEFFMSERSSRLHIVYSLLVNP
DIDLETYSFIDNDRFNVVGKLISIISSVIQNYDIITASSLAHDYNNDQDMFTIVSLVQLK
KFSDLKFILQILQILNLMILNTKVPVDIVNQWFLQYQNQFVEFCRNINSTDKSIDTSSLQ
LYKFQNFQDLSYLSETLISRISSLFTITTILILGLNTSIAQFDIQSPLYMDTETFDTVNS
ALENDVATNIVNEDPIFHPMIHYSWSFILYYRRALQSSESFDDSDITKFALFAESHDVLQ
KLNTLSEILSFDPVYTTVITVFLEFSLNFIPITASTSRVFAKIISKAPEQFIENFLTNDT
FEKKLSIIKAKLPLLNESLIPLINLALIDTEFANFELKDICSFAVTKSSLNDLDYDLIAD
TITNSSSSSDIIVPDLIELKSDLLVAPPLENENSNCLLSIPKSTKGKILTIKQQQQQQQQ
QNGQQPPTTSNLIIFLYKFNGWSLVGRILQNLLHSYMEKGTQLDDLQHELMISIIKLVTN
VVDPKTSIEKSSEILSYLSNSLDTSASTINGASIIQVIFEIFEISLQRKDYTSIVQCCEF
MTMLTPNYLHLVSSYLNKSDLLDKYGKTGLSNMILGSVELSTGDYTFTIQLLKLTKVFIR
ESLSLKNIHISKRSKIDIINKLILHAIHIFESYYNWKYNNFLQKFEIAFHLTLIFYDVLH
DVFTINPHQKDQLIISSSANKLLQLFLTPMDSIDLAPNTLTNILISPLNTTTKILGDKIL
GNLYSKVMNNSFKLCTLLIAIRGSNRDLKPSNLEKLLFINSSKLVDVYTLPSYVHFKVQI
IELLSYLVEAPWNDDYPFLLSFLGEAKSMAFLKEVLSDLSSPVQDWNLLRSLYIFFTTLL
ESKQDGLSILFLTGQFASNKKINDESSIDKKSSILTVLQKNSLLLDSTPEEVSCKLLETI
TYVLNTWTNSKIFIKDPKFVNSLLAKLKDSKKLFQKKENLTRDETVSLIKKYKLISRIVE
IFALCIYNSTDSNSEILNFLNQEDLFELVHHFFQIDGFNKTFHDELNLKFKEKWPSLELQ
SFQKIPLSRINENENFGYDIPLLDIVLKADRSWNEPSKSQTNFKEEITDASLNLQYVNYE
ISTAKAWGALITTFVKRSTVPLNDGFVDLVEHFLKLNIDFGSDKQMFTQIYLERIELSFY
ILYSFKLSGKLLKEEKIIELMNKIFTIFKSGEIDFIKNIGKSLKNNFYRPLLRSVLVLLE
LVSSGDRFIELISDQLLEFFELVFSKGVYLILSEILCQINKCSTRGLSTDHTTQIVNLED
NTQDLLLLLSLFKKITNVNPSKNFNVILASSLNEVGTLKVILNLYSSAHLIRINDEPILG
QITLTFISELCSIEPIAAKLINSGLYSVLLESPLSVAIQQGDIKPEFSPRLHNIWSNGLL
SIVLLLLSQFGIKVLPETCLFVSYFGKQIKSTIYNWGDNKLAVSSSLIKETNQLVLLQKM
LNLLNYQELFIQPKNSDDQQEAVELVIGLDSEHDKKRLSAALSKFLTHPKYLNSRIIPTT
LEEQQQLEDESSRLEFVKGISRDIKALQDSLFKDV
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggctacaccttcatttggcaattcctctccacaattgaccttcactcatgttgctaat
tttatgaacgatgctgctgctgatgtatccgctgtggatgccaagcaattggcccaaata
agacagtttttgaaagctaacaagacaaatcttatcgagagtctgaacacaataaggcag
aatgtaacttcttccggcgatcataacaagttacgctctacaattgcaaacttattgcaa
ataaacgtcgataatgatccattctttgctcaatctgaggacctttctcatgctgtagaa
ttctttatgtctgagagatcatctagacttcatatagtatactcacttctcgttaaccct
gacatcgacctcgagacatattcatttattgacaacgatagattcaatgtagtggggaaa
ttgatttctataatatcatctgtaatccagaactacgacattattacagcttcatcttta
gcacatgattataataacgatcaagacatgttcacaattgtctcattggtgcagttaaaa
aaattttctgatttgaagtttatcttgcagatattacaaattttgaatttaatgatcctc
aacacaaaagtaccagtagatatcgtcaatcaatggtttctacagtatcaaaatcaattt
gttgaattttgcagaaatataaattcaacagacaagagtatagatacctcgtcactacaa
ttgtacaagtttcagaatttccaagacctcagttacctctcagaaacgcttatttccagg
atttcatctttatttactatcacaactatattgatacttggactgaacacttcaatcgcg
caatttgatattcagtcacctttgtacatggatacagaaactttcgacaccgtcaatagc
gctctagagaatgatgtagcaaccaatatcgtcaacgaggaccccattttccatccaatg
attcattactcctggtcatttatactttattataggcgagcattacaatcgtcggaatca
tttgatgattcagacataacgaaatttgctctgtttgctgaatcacatgatgttcttcaa
aaattgaatactctctcagaaattctatcctttgatcctgtttacaccacagtaataaca
gtatttttggagttttctttaaattttattcctataactgcatctacttcccgggttttc
gccaagataatttcaaaggcaccagagcagttcattgagaatttcttaactaatgacact
tttgagaaaaaattgagcatcataaaggctaaattgcccctattgaacgaatcactgatc
ccgctaattaatttagccttaattgataccgagtttgccaattttgaattaaaagatata
tgttcatttgctgttaccaaaagtagtttgaacgatttggattatgacttaattgctgat
acaataacaaactcttcttcatcctccgatattatagtgcctgatttgatagagttgaag
tctgatttactagtggcgccacccttagaaaacgaaaactctaattgtctcttgtcaata
ccaaaatcaacaaagggaaaaattcttactatcaaacaacaacaacaacaacaacaacaa
cagaatggacaacagccgccaactacttccaatttgattattttcctttacaaattcaat
ggttggtctttggtgggtagaatattgcaaaatctattacattcatatatggaaaagggt
acacaactggatgacttacaacatgaattgatgatatccataataaagttagtcactaac
gttgtcgatccgaaaacctcgatcgagaaatctagtgaaattctgtcatatttatcaaat
tctctggatacttcagccagcaccataaatggagcgtcgattatccaagtaattttcgag
atttttgaaatatcactacaaagaaaagattatacctcaattgtacaatgttgtgaattt
atgactatgctgacaccgaattaccttcatcttgtttcttcttacttgaacaaatcggat
ttgttagacaaatatggtaagactggtctttccaatatgatactcggttcggttgaatta
tctacgggggattacacattcactatccaattgcttaagctaacaaaagtctttattcga
gaatctctctcattgaaaaatatccatatttccaagagaagtaaaattgatattattaat
aagttgattctacatgcaattcatatctttgagagttattacaactggaagtacaacaac
ttcttacaaaaattcgaaattgccttccatttgacattaattttttatgatgtacttcat
gacgttttcaccataaatccacatcaaaaggatcagttaatcatttcctcgtcagcaaac
aaattgttgcagttatttttgactcccatggattccattgatttggctccaaatactttg
acgaatattctgatttcaccattgaataccacaacaaaaattttaggcgacaaaattttg
ggtaatttatatagcaaggtaatgaataactccttcaagctgtgcacgcttttgatcgct
attcgaggtagcaatcgtgatttaaagccaagcaacctggaaaaattgcttttcataaat
tcatcaaaattggttgacgtttataccctaccaagttatgttcatttcaaagtgcagatc
atagagttgttaagctatttagtagaggctccttggaatgacgactatccatttctgtta
tctttccttggtgaagcaaagtcaatggcatttttgaaagaagtcctgtcggacctgagc
tctccagtgcaagattggaaccttctccgaagtttgtacattttttttactaccctatta
gaaagtaaacaagatgggttatctatcctcttcttaacaggtcaatttgcctccaataaa
aaaattaatgacgaatcctccatagacaaaaagagttctatattaactgttttgcaaaag
aattctttactattagattcaacgcctgaagaagtaagttgcaagttattagaaacgata
acatatgttttaaacacttggacaaattctaaaatattcataaaagatcctaaatttgtg
aattccttattggctaagttgaaggactcaaaaaaattatttcagaaaaaggaaaatttg
actcgtgacgaaactgtttctttgattaagaaatacaaattgatctcaaggattgtagaa
atatttgcgttgtgtatttacaactccactgattcaaactcggaaattttaaattttttg
aatcaggaagacttgtttgaattagttcatcatttcttccaaattgatgggttcaataaa
acttttcatgatgaattaaacttaaaatttaaagagaaatggcccagtttagagcttcag
tcgttccaaaaaattccattatccagaataaacgaaaatgagaatttcggttatgatatt
ccgttattagatatagttttaaaagctgaccgtagttggaacgaaccaagtaagagtcag
acaaattttaaggaggaaataacagacgcttcattaaatttgcagtatgtcaattacgaa
atatctaccgcaaaagcatggggcgcactaatcaccacgtttgtgaagaggagcactgtt
ccgttaaatgatggttttgtcgacttggtagagcatttcctcaagttaaatattgatttt
ggttcagataaacaaatgtttacccaaatatatctggaaagaattgagttgtcgttttac
attttatattcgttcaagttgtcgggaaaattgttgaaggaagaaaagataattgaattg
atgaacaagatttttacaattttcaaatctggtgagattgactttattaaaaatattggt
aagtcactaaaaaataacttttatagacctcttttgagatctgtcttagttcttctcgag
ttagtctcgtcaggagatcgttttatcgaattaatatctgatcaactactggaatttttt
gaattagtgtttagtaagggtgtttatttgatactgtctgagatattatgtcagatcaat
aaatgctccacgaggggtttaagcaccgatcacaccacccaaattgtcaacttggaggat
aatactcaggatttattgttattattatcactcttcaagaagatcaccaatgtgaatccc
tctaaaaacttcaatgttattctagcatcatccctaaacgaagtaggaactttgaaagtt
atactgaacctatattcaagcgcgcatttgataaggattaacgatgaaccaattcttggg
caaattactctgacctttatctccgaattgtgttctattgagccaattgctgcaaaactc
atcaacagtggattgtatagcgttctattggaaagtccactatctgttgcaatacagcaa
ggtgatataaaacctgaattttcgcctagattgcacaacatttggagcaatggtttgtta
tccattgttctactactattaagtcagttcggtatcaaggttttacctgagacgtgccta
tttgtttcatattttggaaaacaaataaaatctacaatatataactggggtgacaacaag
ttagcagtgtcaagttcgttgataaaggaaacgaatcaattggttttattgcaaaaaatg
ctaaacttgctaaattaccaagaattgtttattcagcctaaaaactctgatgatcaacaa
gaagctgtagaattggttattggtctagattctgaacatgataaaaaaaggttaagcgct
gcattaagcaagtttctaacacatccaaaatacttgaattcaagaataatacctacaact
ttagaagagcaacagcagttggaggatgaatcaagcagattggagttcgtcaagggtatc
agcagagacattaaagcattacaagattcactatttaaggacgtttaa
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integrated database retrieval system
