Saccharomyces cerevisiae (budding yeast): YML103C
Help
Entry
YML103C CDS
T00005
Symbol
NUP188
Name
(RefSeq) Nup188p
KO
K14311
nuclear pore complex protein Nup188
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
YML103C (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YML103C (NUP188)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
YML103C (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_C
Motif
Other DBs
NCBI-GeneID:
854868
NCBI-ProteinID:
NP_013604
SGD:
S000004571
UniProt:
P52593
Structure
PDB
PDBj
LinkDB
All DBs
Position
XIII:complement(62582..67549)
Genome browser
AA seq
1655 aa
AA seq
DB search
MATPSFGNSSPQLTFTHVANFMNDAAADVSAVDAKQLAQIRQFLKANKTNLIESLNTIRQ
NVTSSGDHNKLRSTIANLLQINVDNDPFFAQSEDLSHAVEFFMSERSSRLHIVYSLLVNP
DIDLETYSFIDNDRFNVVGKLISIISSVIQNYDIITASSLAHDYNNDQDMFTIVSLVQLK
KFSDLKFILQILQILNLMILNTKVPVDIVNQWFLQYQNQFVEFCRNINSTDKSIDTSSLQ
LYKFQNFQDLSYLSETLISRISSLFTITTILILGLNTSIAQFDIQSPLYMDTETFDTVNS
ALENDVATNIVNEDPIFHPMIHYSWSFILYYRRALQSSESFDDSDITKFALFAESHDVLQ
KLNTLSEILSFDPVYTTVITVFLEFSLNFIPITASTSRVFAKIISKAPEQFIENFLTNDT
FEKKLSIIKAKLPLLNESLIPLINLALIDTEFANFELKDICSFAVTKSSLNDLDYDLIAD
TITNSSSSSDIIVPDLIELKSDLLVAPPLENENSNCLLSIPKSTKGKILTIKQQQQQQQQ
QNGQQPPTTSNLIIFLYKFNGWSLVGRILQNLLHSYMEKGTQLDDLQHELMISIIKLVTN
VVDPKTSIEKSSEILSYLSNSLDTSASTINGASIIQVIFEIFEISLQRKDYTSIVQCCEF
MTMLTPNYLHLVSSYLNKSDLLDKYGKTGLSNMILGSVELSTGDYTFTIQLLKLTKVFIR
ESLSLKNIHISKRSKIDIINKLILHAIHIFESYYNWKYNNFLQKFEIAFHLTLIFYDVLH
DVFTINPHQKDQLIISSSANKLLQLFLTPMDSIDLAPNTLTNILISPLNTTTKILGDKIL
GNLYSKVMNNSFKLCTLLIAIRGSNRDLKPSNLEKLLFINSSKLVDVYTLPSYVHFKVQI
IELLSYLVEAPWNDDYPFLLSFLGEAKSMAFLKEVLSDLSSPVQDWNLLRSLYIFFTTLL
ESKQDGLSILFLTGQFASNKKINDESSIDKKSSILTVLQKNSLLLDSTPEEVSCKLLETI
TYVLNTWTNSKIFIKDPKFVNSLLAKLKDSKKLFQKKENLTRDETVSLIKKYKLISRIVE
IFALCIYNSTDSNSEILNFLNQEDLFELVHHFFQIDGFNKTFHDELNLKFKEKWPSLELQ
SFQKIPLSRINENENFGYDIPLLDIVLKADRSWNEPSKSQTNFKEEITDASLNLQYVNYE
ISTAKAWGALITTFVKRSTVPLNDGFVDLVEHFLKLNIDFGSDKQMFTQIYLERIELSFY
ILYSFKLSGKLLKEEKIIELMNKIFTIFKSGEIDFIKNIGKSLKNNFYRPLLRSVLVLLE
LVSSGDRFIELISDQLLEFFELVFSKGVYLILSEILCQINKCSTRGLSTDHTTQIVNLED
NTQDLLLLLSLFKKITNVNPSKNFNVILASSLNEVGTLKVILNLYSSAHLIRINDEPILG
QITLTFISELCSIEPIAAKLINSGLYSVLLESPLSVAIQQGDIKPEFSPRLHNIWSNGLL
SIVLLLLSQFGIKVLPETCLFVSYFGKQIKSTIYNWGDNKLAVSSSLIKETNQLVLLQKM
LNLLNYQELFIQPKNSDDQQEAVELVIGLDSEHDKKRLSAALSKFLTHPKYLNSRIIPTT
LEEQQQLEDESSRLEFVKGISRDIKALQDSLFKDV
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggctacaccttcatttggcaattcctctccacaattgaccttcactcatgttgctaat
tttatgaacgatgctgctgctgatgtatccgctgtggatgccaagcaattggcccaaata
agacagtttttgaaagctaacaagacaaatcttatcgagagtctgaacacaataaggcag
aatgtaacttcttccggcgatcataacaagttacgctctacaattgcaaacttattgcaa
ataaacgtcgataatgatccattctttgctcaatctgaggacctttctcatgctgtagaa
ttctttatgtctgagagatcatctagacttcatatagtatactcacttctcgttaaccct
gacatcgacctcgagacatattcatttattgacaacgatagattcaatgtagtggggaaa
ttgatttctataatatcatctgtaatccagaactacgacattattacagcttcatcttta
gcacatgattataataacgatcaagacatgttcacaattgtctcattggtgcagttaaaa
aaattttctgatttgaagtttatcttgcagatattacaaattttgaatttaatgatcctc
aacacaaaagtaccagtagatatcgtcaatcaatggtttctacagtatcaaaatcaattt
gttgaattttgcagaaatataaattcaacagacaagagtatagatacctcgtcactacaa
ttgtacaagtttcagaatttccaagacctcagttacctctcagaaacgcttatttccagg
atttcatctttatttactatcacaactatattgatacttggactgaacacttcaatcgcg
caatttgatattcagtcacctttgtacatggatacagaaactttcgacaccgtcaatagc
gctctagagaatgatgtagcaaccaatatcgtcaacgaggaccccattttccatccaatg
attcattactcctggtcatttatactttattataggcgagcattacaatcgtcggaatca
tttgatgattcagacataacgaaatttgctctgtttgctgaatcacatgatgttcttcaa
aaattgaatactctctcagaaattctatcctttgatcctgtttacaccacagtaataaca
gtatttttggagttttctttaaattttattcctataactgcatctacttcccgggttttc
gccaagataatttcaaaggcaccagagcagttcattgagaatttcttaactaatgacact
tttgagaaaaaattgagcatcataaaggctaaattgcccctattgaacgaatcactgatc
ccgctaattaatttagccttaattgataccgagtttgccaattttgaattaaaagatata
tgttcatttgctgttaccaaaagtagtttgaacgatttggattatgacttaattgctgat
acaataacaaactcttcttcatcctccgatattatagtgcctgatttgatagagttgaag
tctgatttactagtggcgccacccttagaaaacgaaaactctaattgtctcttgtcaata
ccaaaatcaacaaagggaaaaattcttactatcaaacaacaacaacaacaacaacaacaa
cagaatggacaacagccgccaactacttccaatttgattattttcctttacaaattcaat
ggttggtctttggtgggtagaatattgcaaaatctattacattcatatatggaaaagggt
acacaactggatgacttacaacatgaattgatgatatccataataaagttagtcactaac
gttgtcgatccgaaaacctcgatcgagaaatctagtgaaattctgtcatatttatcaaat
tctctggatacttcagccagcaccataaatggagcgtcgattatccaagtaattttcgag
atttttgaaatatcactacaaagaaaagattatacctcaattgtacaatgttgtgaattt
atgactatgctgacaccgaattaccttcatcttgtttcttcttacttgaacaaatcggat
ttgttagacaaatatggtaagactggtctttccaatatgatactcggttcggttgaatta
tctacgggggattacacattcactatccaattgcttaagctaacaaaagtctttattcga
gaatctctctcattgaaaaatatccatatttccaagagaagtaaaattgatattattaat
aagttgattctacatgcaattcatatctttgagagttattacaactggaagtacaacaac
ttcttacaaaaattcgaaattgccttccatttgacattaattttttatgatgtacttcat
gacgttttcaccataaatccacatcaaaaggatcagttaatcatttcctcgtcagcaaac
aaattgttgcagttatttttgactcccatggattccattgatttggctccaaatactttg
acgaatattctgatttcaccattgaataccacaacaaaaattttaggcgacaaaattttg
ggtaatttatatagcaaggtaatgaataactccttcaagctgtgcacgcttttgatcgct
attcgaggtagcaatcgtgatttaaagccaagcaacctggaaaaattgcttttcataaat
tcatcaaaattggttgacgtttataccctaccaagttatgttcatttcaaagtgcagatc
atagagttgttaagctatttagtagaggctccttggaatgacgactatccatttctgtta
tctttccttggtgaagcaaagtcaatggcatttttgaaagaagtcctgtcggacctgagc
tctccagtgcaagattggaaccttctccgaagtttgtacattttttttactaccctatta
gaaagtaaacaagatgggttatctatcctcttcttaacaggtcaatttgcctccaataaa
aaaattaatgacgaatcctccatagacaaaaagagttctatattaactgttttgcaaaag
aattctttactattagattcaacgcctgaagaagtaagttgcaagttattagaaacgata
acatatgttttaaacacttggacaaattctaaaatattcataaaagatcctaaatttgtg
aattccttattggctaagttgaaggactcaaaaaaattatttcagaaaaaggaaaatttg
actcgtgacgaaactgtttctttgattaagaaatacaaattgatctcaaggattgtagaa
atatttgcgttgtgtatttacaactccactgattcaaactcggaaattttaaattttttg
aatcaggaagacttgtttgaattagttcatcatttcttccaaattgatgggttcaataaa
acttttcatgatgaattaaacttaaaatttaaagagaaatggcccagtttagagcttcag
tcgttccaaaaaattccattatccagaataaacgaaaatgagaatttcggttatgatatt
ccgttattagatatagttttaaaagctgaccgtagttggaacgaaccaagtaagagtcag
acaaattttaaggaggaaataacagacgcttcattaaatttgcagtatgtcaattacgaa
atatctaccgcaaaagcatggggcgcactaatcaccacgtttgtgaagaggagcactgtt
ccgttaaatgatggttttgtcgacttggtagagcatttcctcaagttaaatattgatttt
ggttcagataaacaaatgtttacccaaatatatctggaaagaattgagttgtcgttttac
attttatattcgttcaagttgtcgggaaaattgttgaaggaagaaaagataattgaattg
atgaacaagatttttacaattttcaaatctggtgagattgactttattaaaaatattggt
aagtcactaaaaaataacttttatagacctcttttgagatctgtcttagttcttctcgag
ttagtctcgtcaggagatcgttttatcgaattaatatctgatcaactactggaatttttt
gaattagtgtttagtaagggtgtttatttgatactgtctgagatattatgtcagatcaat
aaatgctccacgaggggtttaagcaccgatcacaccacccaaattgtcaacttggaggat
aatactcaggatttattgttattattatcactcttcaagaagatcaccaatgtgaatccc
tctaaaaacttcaatgttattctagcatcatccctaaacgaagtaggaactttgaaagtt
atactgaacctatattcaagcgcgcatttgataaggattaacgatgaaccaattcttggg
caaattactctgacctttatctccgaattgtgttctattgagccaattgctgcaaaactc
atcaacagtggattgtatagcgttctattggaaagtccactatctgttgcaatacagcaa
ggtgatataaaacctgaattttcgcctagattgcacaacatttggagcaatggtttgtta
tccattgttctactactattaagtcagttcggtatcaaggttttacctgagacgtgccta
tttgtttcatattttggaaaacaaataaaatctacaatatataactggggtgacaacaag
ttagcagtgtcaagttcgttgataaaggaaacgaatcaattggttttattgcaaaaaatg
ctaaacttgctaaattaccaagaattgtttattcagcctaaaaactctgatgatcaacaa
gaagctgtagaattggttattggtctagattctgaacatgataaaaaaaggttaagcgct
gcattaagcaagtttctaacacatccaaaatacttgaattcaagaataatacctacaact
ttagaagagcaacagcagttggaggatgaatcaagcagattggagttcgtcaagggtatc
agcagagacattaaagcattacaagattcactatttaaggacgtttaa
DBGET
integrated database retrieval system