Saccharomyces cerevisiae (budding yeast): YMR047C
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Entry
YMR047C CDS
T00005
Symbol
NUP116, NSP116
Name
(RefSeq) FG-nucleoporin NUP116
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
YMR047C (NUP116)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YMR047C (NUP116)
03036 Chromosome and associated proteins [BR:
sce03036
]
YMR047C (NUP116)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
YMR047C (NUP116)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
YMR047C (NUP116)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
855066
NCBI-ProteinID:
NP_013762
SGD:
S000004650
UniProt:
Q02630
Structure
PDB
PDBj
LinkDB
All DBs
Position
XIII:complement(363364..366705)
Genome browser
AA seq
1113 aa
AA seq
DB search
MFGVSRGAFPSATTQPFGSTGSTFGGQQQQQQPVANTSAFGLSQQTNTTQAPAFGNFGNQ
TSNSPFGMSGSTTANGTPFGQSQLTNNNASGSIFGGMGNNTALSAGSASVVPNSTAGTSI
KPFTTFEEKDPTTGVINVFQSITCMPEYRNFSFEELRFQDYQAGRKFGTSQNGTGTTFNN
PQGTTNTGFGIMGNNNSTTSATTGGLFGQKPATGMFGTGTGSGGGFGSGATNSTGLFGSS
TNLSGNSAFGANKPATSGGLFGNTTNNPTNGTNNTGLFGQQNSNTNGGLFGQQQNSFGAN
NVSNGGAFGQVNRGAFPQQQTQQGSGGIFGQSNANANGGAFGQQQGTGALFGAKPASGGL
FGQSAGSKAFGMNTNPTGTTGGLFGQTNQQQSGGGLFGQQQNSNAGGLFGQNNQSQNQSG
LFGQQNSSNAFGQPQQQGGLFGSKPAGGLFGQQQGASTFASGNAQNNSIFGQNNQQQQST
GGLFGQQNNQSQSQPGGLFGQTNQNNNQPFGQNGLQQPQQNNSLFGAKPTGFGNTSLFSN
STTNQSNGISGNNLQQQSGGLFQNKQQPASGGLFGSKPSNTVGGGLFGNNQVANQNNPAS
TSGGLFGSKPATGSLFGGTNSTAPNASSGGIFGSNNASNTAATTNSTGLFGNKPVGAGAS
TSAGGLFGNNNNSSLNNSNGSTGLFGSNNTSQSTNAGGLFQNNTSTNTSGGGLFSQPSQS
MAQSQNALQQQQQQQRLQIQNNNPYGTNELFSKATVTNTVSYPIQPSATKIKADERKKAS
LTNAYKMIPKTLFTAKLKTNNSVMDKAQIKVDPKLSISIDKKNNQIAISNQQEENLDESI
LKASELLFNPDKRSFKNLINNRKMLIASEEKNNGSQNNDMNFKSKSEEQETILGKPKMDE
KETANGGERMVLSSKNDGEDSATKHHSRNMDEENKENVADLQKQEYSEDDKKAVFADVAE
KDASFINENYYISPSLDTLSSYSLLQLRKVPHLVVGHKSYGKIEFLEPVDLAGIPLTSLG
GVIITFEPKTCIIYANLPNRPKRGEGINVRARITCFNCYPVDKSTRKPIKDPNHQLVKRH
IERLKKNPNSKFESYDADSGTYVFIVNHAAEQT
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagttagccgtggcgcattccccagcgcaacaacacagccatttggctcaaca
ggatcaacctttggtggccaacagcaacaacaacaaccagtagcaaacacttctgctttc
ggcctcagtcagcaaacaaatacaacacaagcacctgcgtttggtaactttggtaaccaa
acttctaattctcccttcggaatgtcaggctcgactacagcaaatggtactccttttggt
caaagtcaattgacgaacaacaatgcctctggctcgatcttcggtggaatgggtaataac
acagcactttctgctggttccgcttctgttgtgcccaattctactgcaggtacaagcatt
aaaccttttactacattcgaagagaaggatccaaccacaggtgtcatcaacgtcttccaa
agtatcacctgtatgcctgaatacagaaatttttcttttgaagaattgagatttcaagat
taccaagctggtagaaaattcggtaccagtcaaaatggcactggtactacttttaacaat
cctcaaggaactaccaatactggatttggaattatgggtaataataactccactacttct
gctacaacaggaggattatttggtcaaaagccagcaacaggcatgtttggaaccggaact
ggaagtggtggtggctttggctctggagcgaccaactctacaggattgtttggaagctct
actaacctctcaggaaattctgcatttggagcaaataaacctgccacttccgggggattg
tttggtaatacaactaacaacccaacaaacggcactaataatacaggccttttcggccag
cagaactcaaatacaaacggaggattatttggtcaacagcaaaattcatttggggcgaat
aatgtcagtaacgggggagcctttggtcaggtgaatcgtggtgcctttccccaacaacaa
acacaacaaggtagtggtggtatatttggtcaatcaaacgctaacgcaaatggtggcgct
ttcggccaacagcaaggcactggtgctctttttggagctaaacctgcttctggtggacta
tttggacaatctgctggttcaaaagcattcggaatgaataccaaccccactggtaccact
ggtggcttatttgggcaaaccaatcagcagcaaagtggaggagggttatttggccagcaa
caaaattccaacgctggaggattgttcggtcagaataaccaaagccagaaccaatccgga
ttatttggacaacaaaactcctcaaacgcatttggccagccacagcaacaaggcggatta
tttggaagcaaacctgcaggaggactgtttggacaacagcagggagcatccacttttgcg
tctggtaatgcccaaaataattctatatttgggcaaaataaccaacaacagcaatcaacc
gggggattattcggacaacaaaacaaccagtcgcagtcccaacctggtggattgtttggc
cagaccaatcaaaataataatcagccatttggccaaaatgggttacaacaaccacaacag
aataatagtctttttggagcgaaaccaactggttttggaaatacaagcttattctctaac
agcacaacaaatcaaagtaacggtataagtggaaataatttgcagcagcaatcaggaggt
ttgttccaaaataaacagcaacctgcttcgggtggcctgtttggttcaaaaccatcaaac
actgttggaggcggattatttggaaacaatcaagttgcaaatcaaaacaatcctgcctca
actagcggcggattatttggtagcaaacctgctacaggatcccttttcggaggtactaat
tccacggctccaaacgcctcttcgggtggaatatttgggtccaataatgcatctaacacg
gcggccaccaccaattctactggtttatttggtaataaaccagttggtgcgggagcttct
acaagtgctggaggactatttggaaacaataacaactcgtctctaaacaattccaacggt
tcaacgggcctgtttggtagtaataacacctctcaatctactaatgctggaggcttattt
cagaataacactagtacgaacacttcgggcggagggttattttcccaaccttcccagtca
atggcacaatcacaaaatgcgctccaacaacagcagcagcaacaacgattacaaattcag
aataacaatccctacggtactaatgagcttttttcgaaagcaactgtcaccaacacggtt
tcctatccaattcaaccaagcgctacaaagatcaaagccgatgaacgcaaaaaagccagt
ttgacgaacgcatacaaaatgattcctaaaactttatttacagccaagctcaagactaat
aattccgtcatggataaggcccagatcaaggttgatccaaagttgtcgatttccattgat
aaaaagaataatcagattgcgatttctaaccagcaggaggaaaatttggacgaaagcata
ttaaaagcttctgagttattattcaatcccgataaaaggtcattcaagaatctaattaat
aacaggaaaatgttgatcgcatccgaggaaaagaataacggatcacagaacaacgatatg
aattttaaaagtaaaagtgaagaacaagaaacgatcttgggaaagccaaagatggatgaa
aaagaaactgctaatgggggggaaagaatggttttgtcctcaaagaacgatggggaagat
agcgcaacgaaacatcattcccggaatatggacgaagaaaataaagaaaatgtcgccgat
ttacagaagcaagaatattcagaagatgataaaaaggctgtttttgcggacgttgcggaa
aaagatgcctccttcattaatgagaactactatatctcaccatccctggacacattatcc
tcttattctctcttgcaactgcgcaaagttcctcatttagttgtgggtcataaaagttat
ggtaaaattgaatttcttgaacctgttgacctcgctggaattcctttgacctcattaggg
ggcgtaatcattacttttgaaccaaaaacctgtataatatatgcgaacttaccaaacaga
ccgaagagaggggagggcattaatgttcgggccaggattacctgctttaactgttatcct
gtagacaaatctaccagaaaacctataaaggatccaaatcatcaactggttaaaaggcat
atcgaacgcttaaagaaaaatccaaattctaagttcgaaagctatgatgcagacagtggt
acatacgtgtttatcgtaaaccacgctgcagagcagacctga
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