Saccharomyces cerevisiae (budding yeast): YMR077C
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Entry
YMR077C CDS
T00005
Symbol
VPS20, CHM6, VPL10, VPT20
Name
(RefSeq) ESCRT-III subunit protein VPS20
KO
K12195
charged multivesicular body protein 6
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03250
Viral life cycle - HIV-1
sce04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
YMR077C (VPS20)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
YMR077C (VPS20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YMR077C (VPS20)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sce04147
]
YMR077C (VPS20)
Membrane trafficking [BR:
sce04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
YMR077C (VPS20)
Exosome [BR:
sce04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
YMR077C (VPS20)
Exosomal proteins of other body fluids (saliva and urine)
YMR077C (VPS20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Mating_N
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
855101
NCBI-ProteinID:
NP_013794
SGD:
S000004682
UniProt:
Q04272
Structure
PDB
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All DBs
Position
XIII:complement(421484..422149)
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AA seq
221 aa
AA seq
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MGQKSSKVHITKTDRAILEVKRSKDEIHKFTRRTDNLILVEKSQLKDLIRKNPENYKSNM
KVRFLLKRIHYQEHLLQQASDQLINLENMVSTLEFKMVEKQFINGLKNGNEILKKLNKEF
SNVDELMDDVQDQIAYQNEINETLSRSLVGTSNYEDDLDKELDALESELNPEKMNNAKVA
NMPSTEGLPSLPQGEQTEQKEREEFATEERSDTKEPLALLS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaaaaagtagtaaagtgcatataaccaaaacagatagggcgatcctagaagta
aaacgatctaaagatgaaattcataagtttacgaggaggacagataatttgattttggta
gagaagagtcaactaaaagacctaatacgaaaaaatcctgaaaattataaatctaacatg
aaggtacgatttctactaaaaagaattcattatcaggagcatttgttgcagcaggcttcg
gatcagcttattaatttggaaaatatggtgtcaacacttgagttcaaaatggtagaaaag
caatttattaatggactgaaaaatggaaatgaaatcttgaaaaaactaaacaaggaattt
agcaatgttgatgaactgatggacgatgtacaagatcaaattgcgtatcaaaatgaaatt
aacgagacattatctagaagcttagtcggaacaagcaattatgaagacgatctagataag
gaattggatgctctagaaagtgaactcaatccagagaagatgaataacgcaaaagtagct
aacatgccatcaacagaaggtttgccatcattgcctcaaggagaacaaaccgagcaaaaa
gaaagagaggaattcgcgacggaggagagatcagacactaaggaacctttagcattacta
tcctga
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