Saccharomyces cerevisiae (budding yeast): YMR106C
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Entry
YMR106C CDS
T00005
Symbol
YKU80, HDF2
Name
(RefSeq) ATP-dependent DNA helicase YKU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
YMR106C (YKU80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sce03400
]
YMR106C (YKU80)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
YMR106C (YKU80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Motif
Other DBs
NCBI-GeneID:
855132
NCBI-ProteinID:
NP_013824
SGD:
S000004712
UniProt:
Q04437
Structure
PDB
PDBj
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All DBs
Position
XIII:complement(478301..480190)
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AA seq
629 aa
AA seq
DB search
MSSESTTFIVDVSPSMMKNNNVSKSMAYLEYTLLNKSKKSRKTDWISCYLANCPVSENSQ
EIPNVFQIQSFLAPVTTTATIGFIKRLKQYCDQHSHDSSNEGLQSMIQCLLVVSLDIKQQ
FQARKILKQIVVFTDNLDDLDITDEEIDLLTEELSTRIILIDCGKDTQEERKKSNWLKLV
EAIPNSRIYNMNELLVEITSPATSVVKPVRVFSGELRLGADILSTQTSNPSGSMQDENCL
CIKVEAFPATKAVSGLNRKTAVEVEDSQKKERYVGVKSIIEYEIHNEGNKKNVSEDDQSG
SSYIPVTISKDSVTKAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTS
ESSFITADTRLGCQSDLMAFSALVDVMLENRKIAVARYVSKKDSEVNMCALCPVLIEHSN
INSEKKFVKSLTLCRLPFAEDERVTDFPKLLDRTTTSGVPLKKETDGHQIDELMEQFVDS
MDTDELPEIPLGNYYQPIGEVTTDTTLPLPSLNKDQEENKKDPLRIPTVFVYRQQQVLLE
WIHQLMINDSREFEIPELPDSLKNKISPYTHKKFDSTKLVEVLGIKKVDKLKLDSELKTE
LEREKIPDLETLLKRGEQHSRGSPNNSNN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgagtcaacaactttcatcgtggatgtttcaccatcaatgatgaaaaataat
aatgtttccaaatctatggcatatctagagtacactctattaaacaaatctaaaaaaagt
agaaaaacagattggataagctgttatctcgctaattgtcccgtatctgagaattcccag
gaaataccaaatgtgttccaaatacaatcctttttggctcctgttaccacgacggccacc
attgggtttataaaacgcctgaaacaatattgtgatcagcacagtcatgatagttcgaat
gaaggcttacaatcaatgattcaatgtctgttggtcgtctcattagatattaaacaacaa
tttcaagcaagaaaaattctaaaacaaattgttgtatttacagacaatttagatgatctg
gatattactgatgaagaaatagacctgctaacggaagaattaagcacaagaatcattttg
attgattgcggtaaagacactcaagaggagaggaaaaaatcgaactggttaaagttggtc
gaagcgataccgaattcaagaatctacaatatgaatgaacttcttgttgaaatcacttcc
ccagcaacatctgtcgttaagccagtaagagtattctcaggcgagcttaggttaggggca
gatatattatcaacacaaacatcgaatcctagcggcagcatgcaagatgaaaattgctta
tgtatcaaggtagaggcttttcctgctacgaaagcagtttcaggcttaaataggaaaacc
gctgttgaggtggaagactcccagaagaaagaaaggtatgtgggggtcaaatccataatc
gaatatgaaattcacaacgaaggaaataagaaaaatgtcagtgaagatgaccagtctgga
tcgtcatacattcccgtgaccatctccaaagactctgtaacgaaggcataccgttatggt
gcagactacgtagtgctaccgtccgttctagtcgatcaaactgtatatgaatcttttcca
ggcttggatttaagaggatttttgaatagagaagctcttccaaggtactttttgacgtcg
gaatcctccttcattaccgccgacacaagacttggctgtcaatctgacttaatggctttc
agtgctctagtggatgttatgctagaaaatagaaaaattgctgttgcaagatatgtgagc
aagaaagacagtgaagtgaatatgtgtgcattgtgtcccgttctaattgagcacagtaac
attaattccgagaagaagtttgttaagagccttaccttgtgtagattaccattcgcggaa
gacgagagggtaactgattttccaaaacttctggatcgaacaactacatccggggtaccg
ctgaaaaaggaaacagacgggcatcaaatcgatgagcttatggaacaatttgtagattca
atggatacagatgagctaccagagattccgttaggcaactactatcaacccataggcgaa
gtaacaacagacaccactctcccacttccctctttaaataaagaccaagaggaaaacaaa
aaggatcctcttagaatacccacggtttttgtctacaggcaacaacaggtgctactggaa
tggattcaccaactgatgatcaatgattccagggaatttgaaatcccagagcttcctgac
tcattgaaaaacaaaataagtccttacacgcacaagaaatttgatagcacaaaattggtt
gaagtgctcggcatcaagaaagtagacaaattaaaactcgactccgaactaaaaactgag
cttgagagggaaaagatcccggacctagaaacgctattgaagcgcggtgaacaacacagt
aggggaagtccaaacaatagcaataattaa
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