Saccharomyces cerevisiae (budding yeast): YMR125W
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Entry
YMR125W CDS
T00005
Symbol
STO1, CBC1, CBP80, GCR3, SUT1
Name
(RefSeq) Sto1p
KO
K12882
nuclear cap-binding protein subunit 1
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013
Nucleocytoplasmic transport
sce03015
mRNA surveillance pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YMR125W (STO1)
09122 Translation
03013 Nucleocytoplasmic transport
YMR125W (STO1)
03015 mRNA surveillance pathway
YMR125W (STO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YMR125W (STO1)
03041 Spliceosome [BR:
sce03041
]
YMR125W (STO1)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
YMR125W (STO1)
Spliceosome [BR:
sce03041
]
Common components
Common spliceosomal components
Cap binding complex
YMR125W (STO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
GBD_ELAPOR1
Motif
Other DBs
NCBI-GeneID:
855155
NCBI-ProteinID:
NP_013844
SGD:
S000004732
UniProt:
P34160
Structure
PDB
PDBj
LinkDB
All DBs
Position
XIII:join(517539..517563,517886..520446)
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AA seq
861 aa
AA seq
DB search
MFNRKRRGDFDEDENYRDFRPRMPKRQRIPPVVQLCKEMMPDIRTIGESVKAFEDDIKFL
SEAIMNEYGHEDYFNNALLSTLNAVVVEQPQKQAAIALLTMVVNSKNNVAGKSIINYFFE
ELQKWCKQTYNDEFKSTSNETGPWNKIKLILRFLSILSPMFLVDELINIYKSLFELSIEL
NNLDPGNRVPLSEAIYTNTLLNIPYLFFFNRNNDGLRTKVEELLAYVEQNYLVKTTDINL
LREYNGEPPYEMVELVRVVLPNVKKALINNLEQLNELFPDWNHLLTPQTGDEGFNDALTL
PSVDDLKSFVRLNKNFGSVDSMWKTPRYAFHVYLPNSAGNFETVVPISTYAGQLFNDIII
DLVESLEFNRKEVARQVITLDLFFKAGIFTEPGESIAQLIATYEENPLAPTFKIEDLAIE
TILGLIFKLPSVSQPFAYFYTLLVDICQNSPKAIAPVFGRAFRFFYSHLDSLDFELKLRY
LDWFSIQMSNFNFSWKWNEWEDDSIKFGKYFYNPKVNFAKNLIQKELRLTSNFSEVEDSL
PQEFTKYLDTSYIPRDQLINYYQSLFTGYTVEEDSVRKNDLYFRQEGVPMENTVRKILDY
THKANNSREVTELESILGELKNEYGSIISDFNRFVIILLVQAVTDSGSRSLSHANKYIND
LKEDLKTIFAKIELDIETKEYIIIEAVLTFWNANPQTGFLVADAFKYAGLLTSRTIFTFI
FNETGLKNNGLIEATAIEAVFRNLSQQISEENESGNNFEFVFERLCTIANSTIDLLDVNA
DEDIEIPKVNGEMDIDDIEDDKLDLKWKYFTVIGFIKSILRRYSHEYRELADKFIANIDN
AIPHESTRRTISNWIQETKEV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatagaaaaagaagaggagacttcgatgaagatgaaaattaccgtgattttagg
cctcgcatgcctaaaagacagagaatcccacctgttgtacaactgtgtaaagaaatgatg
cccgatattcgcactattggtgaatctgttaaagcttttgaagatgatatcaaattcttg
agtgaagctataatgaatgagtatggccatgaggactactttaataatgctttactgagc
actttaaacgctgttgttgtggagcaaccacagaagcaagctgctatcgctctcttaacc
atggttgttaattcgaaaaataatgttgccggaaagagtattatcaattacttcttcgaa
gaattacaaaaatggtgcaagcaaacatataatgatgaattcaagagtacgtcaaatgaa
actgggccatggaacaagatcaagttaatcctgagatttttatccattctatcgcccatg
tttttagttgatgaactaatcaatatctacaagagcttatttgaattgagtatcgaatta
aacaatctggatccaggtaacagagttcctttatctgaagcaatttacaccaatacatta
ttaaatatcccgtatttgttcttttttaataggaataatgacggtttgaggacaaaagtg
gaggagttacttgcatacgttgaacaaaactatctagttaaaacaacggatataaaccta
ttaagagaatacaatggtgaacctccatatgaaatggtagaacttgtccgagtcgtatta
ccaaacgtcaagaaggcgctaatcaataacttggaacagctgaatgaattatttcctgat
tggaatcatttattaactccccaaaccggtgatgaagggttcaatgacgctttaaccctt
ccatcagtagatgatctaaagtctttcgtgcgcttgaataaaaactttggttcagttgat
agcatgtggaagacaccaaggtatgcttttcatgtttacttgccaaactccgctggtaat
ttcgaaacagttgtaccaatcagcacttatgctggtcaattattcaacgatatcattatt
gatctggtggaaagtttagaattcaatagaaaggaagtagctagacaagtgataactttg
gatctttttttcaaagcaggtatatttacagaacctggtgaatctattgcccaattaatt
gccacttatgaagagaacccattggctcctacatttaagatagaagatttggctattgaa
accattttgggacttatttttaaattacctagtgtttcccagccttttgcatacttttac
actttattggtggatatttgtcaaaattctccaaaagcaattgctcctgtctttggtaga
gcctttaggtttttttatagtcatttggattcattagattttgaactaaaattaagatat
ttggactggttttcaattcaaatgagcaactttaatttttcttggaagtggaatgaatgg
gaagacgattcgatcaaatttggcaagtatttttataatccaaaggtaaattttgctaaa
aatttgattcaaaaagaactacgattgacctctaacttttcagaagtagaggacagccta
ccacaagaattcacgaaatatttggatacttcttacattccaagagatcaactgattaac
tactatcaatcattattcaccggttatacggtagaagaagattccgttagaaaaaatgat
ctatattttagacaagaaggtgtacctatggaaaacacagtccgtaaaattttagattat
acccacaaagcaaacaattctagggaagttactgaattagaaagtattctaggtgagtta
aagaatgagtatggttccataatttccgactttaacagatttgttatcatattgttagtc
caggccgttacagactctggtagtagatctttatcacatgctaataaatatattaatgat
ttaaaagaagatctcaaaaccatatttgcgaagattgaattggatatcgagacaaaagag
tatatcataattgaagccgtcctaacattttggaacgccaaccctcagacaggtttctta
gtagcagatgcattcaaatatgcaggtttacttacttccagaaccatttttacatttata
tttaacgaaactggtttgaagaataatggtttgattgaagctacagcaattgaagcggtc
tttagaaatttatctcaacaaatctcggaagagaacgaaagtggaaataattttgagttc
gttttcgaaagattatgtaccatcgccaacagtactatagacttactagatgtcaatgct
gatgaagatattgagatacctaaagtcaacggggaaatggacatcgacgatattgaagat
gataaactggatttgaaatggaaatattttacagtgattgggtttattaaaagtatatta
agaaggtattcccacgaatatcgtgagttagcagacaaattcattgccaacattgataac
gctattccacacgaatccactaggagaacaatttcgaattggattcaagaaacaaaggaa
gtttaa
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