Saccharomyces cerevisiae (budding yeast): YMR197C
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Entry
YMR197C CDS
T00005
Symbol
VTI1
Name
(RefSeq) v-SNARE protein VTI1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04130
SNARE interactions in vesicular transport
sce04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
YMR197C (VTI1)
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
YMR197C (VTI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sce04131
]
YMR197C (VTI1)
Membrane trafficking [BR:
sce04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
YMR197C (VTI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Nsp1_C
Fusion_gly
DUF1081
7TMR-HDED
YqjK
Endonuc_Holl
Motif
Other DBs
NCBI-GeneID:
855237
NCBI-ProteinID:
NP_013924
SGD:
S000004810
UniProt:
Q04338
Structure
PDB
PDBj
LinkDB
All DBs
Position
XIII:complement(658545..659198)
Genome browser
AA seq
217 aa
AA seq
DB search
MSSLLISYESDFKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMDVEVN
NSIGDASERATYKAKLREWKKTIQSDIKRPLQSLVDSGDRDRLFGDLNASNIDDDQRQQL
LSNHAILQKSGDRLKDASRIANETEGIGSQIMMDLRSQRETLENARQTLFQADSYVDKSI
KTLKTMTRRLVANKFISYAIIAVLILLILLVLFSKFK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagttccctattaatatcatacgaatctgacttcaaaacaaccttagaacaagccaaa
gcgagcttagcagaggccccctcacaaccgttatcacagagaaatactacactgaagcac
gtagaacagcaacaagatgagttgtttgacctgctagatcagatggatgtagaagttaat
aacagcataggcgatgcctcagaacgtgctacgtacaaggcgaagttaagagaatggaag
aagactatacagagcgatatcaaacgaccactgcaatccttagtagactcaggcgatcgt
gatagactttttggagatcttaacgcatctaatattgacgatgaccaaaggcaacagttg
ttgagcaaccatgcaatcttacagaaatcgggagatagactaaaagatgccagtagaata
gcaaatgaaactgaaggaatagggtcacaaataatgatggatttaaggtcacagagagaa
actttggaaaatgcaagacagaccttgtttcaagcggattcatatgtggataaaagtata
aagacactaaaaacaatgactagaaggctagttgctaataaattcataagctatgccatt
atcgcagtccttatattattgattttgctagttttgttctcaaagtttaaataa
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