KEGG   Saccharomyces cerevisiae (budding yeast): YMR213W
Entry
YMR213W           CDS       T00005                                 
Symbol
CEF1, NTC85
Name
(RefSeq) Cef1p
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    YMR213W (CEF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sce03041]
    YMR213W (CEF1)
   03400 DNA repair and recombination proteins [BR:sce03400]
    YMR213W (CEF1)
Spliceosome [BR:sce03041]
 Complex B
  Other components
   Prp19 complex
    YMR213W (CEF1)
 Complex C
   Prp19-CDC5 complex
    YMR213W (CEF1)
DNA repair and recombination proteins [BR:sce03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    YMR213W (CEF1)
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_6 Myb_Cef Rap1_C Ribosomal_L32p
Other DBs
NCBI-GeneID: 855253
NCBI-ProteinID: NP_013940
SGD: S000004826
UniProt: Q03654
Structure
LinkDB
Position
XIII:693381..695153
AA seq 590 aa
MPPVPIYVKGGVWTNVEDQILKAAVQKYGTHQWSKVASLLQKKTARQSELRWNEYLNPKL
NFTEFSKEEDAQLLDLARELPNQWRTIADMMARPAQVCVERYNRLLESEDSGGAALSTGV
TDLKAGDINPNAETQMARPDNGDLEDEEKEMLAEARARLLNTQGKKATRKIRERMLEESK
RIAELQKRRELKQAGINVAIKKPKKKYGTDIDYNEDIVYEQAPMPGIYDTSTEDRQIKKK
FEQFERKVNRKGLDGNKDKPSKKNKDKKRKHDENEHVEKAALGESTTLTDEYKKPKLILS
APGTKQGKVTYKKKLESKRQKLIEAQATGTVLTPKELLPHDSGQEDNERSNIKSGKQLKS
RIRKFLVQMFASLPSPKNDFEIVLSEDEKEEDAEIAEYEKEFENERAMNEEDNFIEPPSQ
NDAPRVSLVAVPLAYSTLPIPEFKNNPQSAIDNKYNLLVANAINKEPHMVPEDTVDFLKE
VESRMQHITQGRTSMKIQFKTAMPPTEVLLESIQSKVESIEQLQRKLQHVQPLEQQNNEM
CSTLCHHSLPALIEGQRKYYADYYAYRQEIRSLEGRRKRLQAMLNSSSSI
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgccccccgtaccaatatacgtgaaaggcggtgtatggaccaatgtggaggatcagatt
cttaaagcggctgtacaaaaatacggaactcatcagtggagcaaagtagcatcccttttg
cagaaaaagactgccaggcagagtgaattaaggtggaatgaatatttaaatccaaagttg
aattttacagagttctcgaaggaggaggatgcccaacttctagatcttgcaagagagctg
cctaatcagtggaggaccatagctgatatgatggccaggcctgcacaggtctgcgtcgaa
agatataataggctattagaaagtgaagacagtggaggggctgcgttaagtacaggagtt
actgacttgaaagccggggatattaatcctaacgctgaaactcaaatggctagaccagat
aatggtgatttggaagatgaggaaaaggaaatgcttgctgaagctagggctcgtctgtta
aatacccaaggtaagaaggctacaagaaagattagagagcggatgctcgaagaatcaaaa
cgcattgctgaactacaaaagaggcgtgagctaaagcaagcaggaattaatgttgccatt
aagaaaccgaaaaaaaaatacggcaccgacattgattacaatgaagatatagtatatgaa
caagctcccatgccaggtatatatgacacgtccactgaagaccgccagataaaaaagaag
tttgagcagtttgagagaaaagtcaacagaaaaggtttggatggtaataaggataagcca
agtaaaaaaaataaggacaaaaaaagaaaacacgatgagaacgaacacgttgagaaagca
gcactgggtgaatctactacattgacggatgagtataaaaaaccaaaacttatactatct
gcaccaggaacgaaacagggaaaagtcacctataaaaaaaagctagaaagcaaaagacaa
aaactaatcgaggcacaagcaactggcactgtgttgacaccaaaagaactactaccccac
gactccggccaagaagataatgaacgcagtaatataaagagtggtaaacagctaaaatca
cgcatacgaaaatttttagtgcaaatgttcgcatctttgcctagtcccaagaacgatttc
gaaattgtattaagtgaagacgagaaagaagaagatgcagagatagcggaatacgagaaa
gaatttgaaaatgaaagagcgatgaatgaagaggacaacttcatagaaccaccatctcaa
aatgatgcgccacgcgtctcattagtagccgttccattagcttactcaacgctacccata
ccagaattcaaaaacaatccgcagtccgcgattgacaataagtacaacttgctagtcgcg
aacgccataaacaaagaacctcacatggtaccagaagatacggtagattttctcaaagag
gtggagtcgcgtatgcagcatataacccaagggcgcacttccatgaaaatacaattcaaa
acagcaatgcccccaactgaggttcttctggaatcgatccaatcaaaagtggagtctatt
gaacagttacagcgtaaactacaacatgtgcaaccactggaacaacagaataacgagatg
tgcagtaccctctgccatcacagcctgcccgctttgattgaagggcaacgcaagtactac
gctgattactacgcctaccgacaagagatacgatcgcttgagggtcgtagaaagcgtctt
caagccatgctaaattcttcttcttccatatag

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