Saccharomyces cerevisiae (budding yeast): YMR229C
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Entry
YMR229C CDS
T00005
Symbol
RRP5
Name
(RefSeq) Rrp5p
KO
K14792
rRNA biogenesis protein RRP5
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sce03009
]
YMR229C (RRP5)
Ribosome biogenesis [BR:
sce03009
]
Eukaryotic type
90S particles
Other 90S particles
YMR229C (RRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
HAT_PRP39_N
HAT_PRP39_C
OB_RRP5_4th
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
Ribosomal_S4e
FAM171A1-2-B_N
Motif
Other DBs
NCBI-GeneID:
855269
NCBI-ProteinID:
NP_013956
SGD:
S000004842
UniProt:
Q05022
Structure
PDB
PDBj
LinkDB
All DBs
Position
XIII:complement(725934..731123)
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AA seq
1729 aa
AA seq
DB search
MVASTKRKRDEDFPLSREDSTKQPSTSSLVRNTEEVSFPRGGASALTPLELKQVANEAAS
DVLFGNESVKASEPASRPLKKKKTTKKSTSKDSEASSANSDEARAGLIEHVNFKTLKNGS
SLLGQISAITKQDLCITFTDGISGYVNLTHISEEFTSILEDLDEDMDSDTDAADEKKSKV
EDAEYESSDDEDEKLDKSNELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTI
EPSSVNIYADEDLVKSTSIQCAVKSIEDHGATLDVGLPGFTGFIAKKDFGNFEKLLPGAV
FLGNITKKSDRSIVVNTDFSDKKNKITQISSIDAIIPGQIVDLLCESITKNGIAGKVFGL
VSGVVNVSHLRTFSEEDLKHKFVIGSSIRCRIIACLENKSGDKVLILSNLPHILKLEDAL
RSTEGLDAFPIGYTFESCSIKGRDSEYLYLALDDDRLGKVHSSRVGEIENSENLSSRVLG
YSPVDDIYQLSTDPKYLKLKYLRTNDIPIGELLPSCEITSVSSSGIELKIFNGQFKASVP
PLHISDTRLVYPERKFKIGSKVKGRVISVNSRGNVHVTLKKSLVNIEDNELPLVSTYENA
KNIKEKNEKTLATIQVFKPNGCIISFFGGLSGFLPNSEISEVFVKRPEEHLRLGQTVIVK
LLDVDADRRRIIATCKVSNEQAAQQKDTIENIVPGRTIITVHVIEKTKDSVIVEIPDVGL
RGVIYVGHLSDSRIEQNRAQLKKLRIGTELTGLVIDKDTRTRVFNMSLKSSLIKDAKKET
LPLTYDDVKDLNKDVPMHAYIKSISDKGLFVAFNGKFIGLVLPSYAVDSRDIDISKAFYI
NQSVTVYLLRTDDKNQKFLLSLKAPKVKEEKKKVESNIEDPVDSSIKSWDDLSIGSIVKA
KIKSVKKNQLNVILAANLHGRVDIAEVFDTYEEITDKKQPLSNYKKDDVIKVKIIGNHDV
KSHKFLPITHKISKASVLELSMKPSELKSKEVHTKSLEEINIGQELTGFVNNSSGNHLWL
TISPVLKARISLLDLADNDSNFSENIESVFPLGSALQVKVASIDREHGFVNAIGKSHVDI
NMSTIKVGDELPGRVLKIAEKYVLLDLGNKVTGISFITDALNDFSLTLKEAFEDKINNVI
PTTVLSVDEQNKKIELSLRPATAKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKV
EAFVPVSKLSDSYLKEWKKFYKPMQYVLGKVVTCDEDSRISLTLRESEINGDLKVLKTYS
DIKAGDVFEGTIKSVTDFGVFVKLDNTVNVTGLAHITEIADKKPEDLSALFGVGDRVKAI
VLKTNPEKKQISLSLKASHFSKEAELASTTTTTTTVDQLEKEDEDEVMADAGFNDSDSES
DIGDQNTEVADRKPETSSDGLSLSAGFDWTASILDQAQEEEESDQDQEDFTENKKHKHKR
RKENVVQDKTIDINTRAPESVADFERLLIGNPNSSVVWMNYMAFQLQLSEIEKARELAER
ALKTINFREEAEKLNIWIAMLNLENTFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEIS
EKFDKAAELFKATAKKFGGEKVSIWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEV
VRKFAQLEFAKGDPERGRSLFEGLVADAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIIT
KKITRKQAKFFFNKWLQFEESEGDEKTIEYVKAKATEYVASHESQKADE
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggtagcttccaccaaaagaaagagagatgaagattttccactttcgagggaagactcc
acaaagcagccctctacctcatcattagtaaggaacactgaggaagtctcttttccaagg
ggtggtgcgtctgctttgactcctttagaactgaaacaagttgctaacgaagctgcaagt
gatgtgttatttggtaatgaaagtgtcaaagcatctgaaccagcaagtagacccttgaaa
aagaagaagacaacaaagaaatccacttctaaagattccgaggcctcatcagcaaactct
gatgaagctagagctggactaattgaacatgtcaactttaaaacgttgaagaatggctct
tctttgcttggtcagatttctgctatcactaaacaagatttatgtataacattcacagac
ggaatttctggttatgtgaacctaacacatatctcagaagaatttacttcgattttggaa
gatctggatgaagatatggatagtgatactgatgctgctgatgagaaaaaatccaaagtt
gaagatgcagaatacgaatcgtccgacgacgaagatgaaaaattagataaatctaatgaa
ttacctaatttaagaaggtactttcacattggtcaatggctaagatgctctgtcatcaag
aatacctctttagaaccatcaactaagaaatccaaaaagaagagaatagagttaaccatc
gaaccttcatccgtcaacatatacgcagatgaagatttggttaaatccacgtctattcaa
tgcgcggtcaaatccatcgaggatcacggtgctaccttagatgttggtctgccaggcttt
acagggttcattgctaagaaggattttggcaattttgaaaaattattgccgggggctgtt
ttcttaggtaatatcaccaaaaaatccgacagatcaattgttgtaaatacagacttttcg
gacaagaaaaacaaaattactcaaatctcctcaattgatgccattatccctggtcaaatc
gtcgacttattgtgtgaatcaatcactaaaaatggtattgccggtaaagtttttgggtta
gtatccggtgttgtcaacgtatcacatttaagaacattttccgaagaagatttaaagcat
aaatttgttattggttctagtattagatgccgaattattgcttgtttagaaaacaaaagc
ggtgacaaggtcttgattttgtcaaaccttccacacattttaaaactagaagacgctttg
agatctactgaaggtcttgatgcattccctatcggctacacatttgaatcatgcagcatt
aaagggcgtgattccgaatatctatacttagcattggatgatgatagattaggtaaagta
cattcttcaagagttggtgaaattgaaaattcagaaaatttaagttccagggtccttggt
tatagccctgttgatgacatttatcaattgtccactgatccaaaatacctaaaattaaag
tatctaagaacaaatgatattccaatcggagaattattaccaagttgtgaaataacttcc
gtctctagttcaggtattgaattgaagatatttaacgggcaatttaaggcttctgttcca
ccattacacatttcagataccaggctagtttatccagaaaggaagttcaagataggttct
aaggttaaaggtagagttatatcagttaattcaagaggtaatgtgcatgtcactttgaaa
aaatcattagttaatattgaagacaacgaattaccactggtttccacttatgaaaacgcc
aaaaatatcaaagaaaaaaatgaaaagactttagcaactattcaagttttcaaaccaaat
ggttgcatcatttccttttttggtggtttatcgggatttttacctaattctgagatctca
gaagtctttgtgaagagaccagaagaacatttaagactcggtcaaacagtaatagtaaaa
cttcttgacgtcgatgctgacaggaggagaattattgccacatgcaaagtttcaaatgaa
caggctgcccaacaaaaagataccattgaaaatattgttccaggcagaacaatcattact
gtccatgttatcgaaaaaaccaaagattctgttattgttgaaattcctgatgttggcttg
cgtggtgtcatctacgttggtcatctctctgattccagaattgaacaaaatagggctcag
ttgaaaaagctcagaatcggcactgaactgactggtttggtaattgataaagatacaaga
acccgcgttttcaatatgtccctcaaaagttctctgattaaagacgctaaaaaggagact
cttccattaacatatgatgatgttaaggatctaaataaagatgtaccaatgcacgcttac
attaaatccatttctgataagggtctctttgttgcatttaacggtaagttcattgggttg
gttttaccaagttacgctgttgatagtagggatattgatatcagcaaggcgttttatatt
aaccaatccgttaccgtctatttattaagaacagacgacaaaaaccagaaattcctatta
tctctaaaagctccaaaggtcaaagaagagaagaagaaagttgaatctaatatcgaagat
cctgttgattcgtctatcaaaagctgggacgatttgtctattggtagtattgttaaagca
aaaatcaagagcgtcaagaaaaatcaattgaatgttattttagcggcaaatttgcatggc
agagtggacattgctgaagtgtttgacacgtatgaagaaattacagataagaaacagccg
ttgagtaattacaaaaaagacgatgtcatcaaggtaaaaatcataggtaatcacgatgtc
aagagccataagttcttgccgattacacacaaaatctcaaaggctagcgttttggaatta
tccatgaaaccatcagaattaaaatctaaggaagtgcacacaaaaagtcttgaggaaatc
aacattgggcaagagttaactggctttgtcaacaattcatcaggtaaccacctatggcta
acaatttctccagttttgaaggcgagaatttctctactagatttagctgataacgattca
aatttttcagaaaatattgaatctgttttcccattaggttcagccctccaagtgaaagtt
gcctctattgaccgcgagcatggctttgtcaatgccattggaaagagtcatgttgacata
aatatgtccacaattaaagttggtgatgaattgccaggtcgtgttctaaaaatagctgaa
aagtatgttttgttagaccttggtaacaaagtgactggtatttcctttattacggatgcg
ttaaatgatttctccctaacattgaaggaagcttttgaagacaaaattaacaacgtcatt
ccaactaccgttttatctgttgatgaacagaataagaaaattgaactatcccttcgtcct
gctactgcaaaaactcgttcgatcaaatctcatgaagatttgaagcaaggcgagattgta
gatggtattgttaagaatgtgaatgacaaaggtatttttgtttacttgagtaggaaagtt
gaagcctttgtccctgttagtaaactatctgattcttacttgaaggaatggaagaagttt
tacaagcctatgcaatacgttttgggaaaagtcgttacatgcgatgaagattctcgtatt
tctctaaccctaagagaatccgaaataaatggtgatttaaaggttctaaagacctattca
gacattaaggctggtgatgttttcgagggtacaattaaaagcgtcactgattttggtgtt
ttcgtcaaactagataacactgttaatgttactggtttggcacatattactgaaattgcg
gacaaaaaacctgaagatctttctgccttgtttggtgttggggacagagtaaaagctatt
gttttgaaaacaaatccagaaaaaaaacaaatttcattgagcttgaaagcgtctcatttc
tctaaagaagccgaattggcttctactaccaccaccactactactgtggatcaactggaa
aaggaggatgaagatgaagtcatggcagatgctggcttcaacgattccgacagcgaatct
gatatcggagaccaaaacaccgaagttgccgataggaagcctgaaacatcttcggatggg
ctatccttgagtgctggttttgattggactgcttccattttggatcaagcgcaagaagaa
gaagagtctgaccaagatcaagaagactttactgaaaataagaaacacaagcacaagaga
agaaaggaaaatgttgttcaggataagaccattgatatcaacactagggcaccagaatct
gttgccgattttgaacgtctacttatcggtaatccaaattcgtccgtagtgtggatgaac
tatatggctttccaactacaactgagtgagatcgagaaggctcgagagctcgcagaacgt
gcgctaaagaccatcaacttcagagaagaagccgagaagttgaatatttggattgcaatg
ctgaatttagaaaatacttttggtaccgaagaaactttagaagaagtgtttagcagggct
tgtcagtatatggactcatatactattcatacaaaactgcttggtatttatgaaataagt
gaaaagttcgacaaagcagcagaattattcaaagctacagctaagaaatttggcggcgag
aaagtttctatctgggtatcgtggggtgattttttgatcagccacaatgaagagcaagag
gcacgtactattttaggtaatgctttgaaggccctaccaaagcgtaatcatatcgaggtt
gtccgcaagtttgctcaattagaatttgcaaagggtgacccagaaaggggtcggtcatta
ttcgaaggtttggttgctgatgcgccaaagagaattgacctgtggaacgtttacgtagac
caggaagtgaaggcaaaagataagaagaaggtggaagatttatttgagagaataataacc
aaaaaaataacaaggaagcaggctaagtttttctttaataaatggttacaatttgaggaa
tctgaaggtgacgaaaagaccattgaatacgttaaagctaaagctactgagtatgtcgct
agccatgaatctcaaaaagcagacgaataa
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integrated database retrieval system
